RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PHF21AQ96BD5 680 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FOXN4Q96NZ1 517 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 DERL3Q96Q80 235 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PDCD1LG2Q9BQ51 273 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 TTTY12Q9BZ98 90 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ZNF703Q9H7S9 590 aaPredicted RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 PLA2G3Q9NZ20 509 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 OR52A1Q9UKL2 312 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 LRP12Q9Y561 859 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 A0A0G2JMM0 328 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 TMEM269A0A1B0GVZ9 245 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 A0A1W2PPB8 328 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 A0A1W2PRS3 328 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FAM166BA8MTA8 275 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 KIR3DP1A8MWS1 328 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SC5DO75845 299 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ZFPL1O95159 310 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PRKAR1AP10644 381 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SRMP19623 302 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 NR4A2P43354 598 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SOX2P48431 317 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SCAND1P57086 179 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 H3F3AP84243 136 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SCRN3Q0VDG4 424 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 CDC20Q12834 499 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ECH1Q13011 328 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 RTP5Q14D33 572 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ABLIM2Q6H8Q1 611 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 CNIH2Q6PI25 160 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 LRRC69Q6ZNQ3 347 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 VASH2Q86V25 355 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 CATSPERDQ86XM0 798 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 LAX1Q8IWV1 398 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ZNF283Q8N7M2 679 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 MDS2Q8NDY4 140 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 GJC3Q8NFK1 279 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 TRMT10AQ8TBZ6 339 aaKnown RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 OR2M2Q96R28 347 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 POLE4Q9NR33 117 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 EXTL2Q9UBQ6 330 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 GDF2Q9UK05 429 aaPredicted RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 ETV7Q9Y603 341 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SMIM30A4D0T7 59 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 B4DXG7 233 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 WISP1O95388 367 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 F10P00742 488 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ERCC1P07992 297 aaPredicted RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 CALCBP10092 127 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FCGR2AP12318 317 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SUCLG1P53597 346 aaKnown RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 CLDN15P56746 228 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PSMA6P60900 246 aaKnown RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 FOXK1P85037 733 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 FOXO1Q12778 655 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 STK11Q15831 433 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ETFDHQ16134 617 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 HYAL4Q2M3T9 481 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 WDR38Q5JTN6 314 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 PYHIN1Q6K0P9 492 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 LRFN4Q6PJG9 635 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 ABHD12BQ7Z5M8 362 aaPredicted RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 LINC00346Q8IVM7 164 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 C20orf196Q8IYI0 205 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 TMEM251Q8N6I4 163 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SAMD12Q8N8I0 201 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 CPT1CQ8TCG5 803 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SPTSSAQ969W0 71 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 TMEM45BQ96B21 275 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SIGLEC12Q96PQ1 595 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 RBM24Q9BX46 236 aaKnown RBP5.36□□□□□ -1.55
VPS50-205ENST00000441602 NELFAQ9H3P2 528 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 BRD7Q9NPI1 651 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 DEPPQ9NTK1 212 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 MPDZO75970 2070 aa5.36□□□□□ -1.55
VPS50-205ENST00000441602 SDK2Q58EX2 2172 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 TTLL8A6PVC2 850 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 SMAD9O15198 467 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 CYTIPO60759 359 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 HPGDSO60760 199 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 NCR1O76036 304 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 GPANK1O95872 356 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ZNF20P17024 532 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ZNF24P17028 368 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 EVX1P49640 407 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 CCL11P51671 97 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ZNF133P52736 654 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 MRPS34P82930 218 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 RNPS1Q15287 305 aaKnown RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 SF3B4Q15427 424 aaKnown RBP eCLIP5.35□□□□□ -1.552e-7■■□□□ 14.3
VPS50-205ENST00000441602 DCDC5Q6ZRR9 648 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 COMMD2Q86X83 199 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 OR13C3Q8NGS6 347 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 OR13C5Q8NGS8 318 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 FOXRED1Q96CU9 486 aaPredicted RBP5.35□□□□□ -1.55
VPS50-205ENST00000441602 HDHD2Q9H0R4 259 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 EMC7Q9NPA0 242 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 ACKR4Q9NPB9 350 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 FAIMQ9NVQ4 179 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
VPS50-205ENST00000441602 FOXJ3Q9UPW0 622 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms