RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 BRD7Q9NPI1 651 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 ANKRD10Q9NXR5 420 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 LRFN1Q9P244 771 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 CKLFQ9UBR5 152 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 MALT1Q9UDY8 824 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 GTF2A1LQ9UNN4 478 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 DHDHQ9UQ10 334 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 RCE1Q9Y256 329 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 V9GY05 133 aa11.73□□□□□ -0.53
CPSF4-206ENST00000441580 IGKV1D-43A0A0B4J1Z2 117 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 A0A1W2PPK0 400 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 UBL3O95164 117 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 ISG15P05161 165 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 HNRNPCP07910 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 PRKAR1AP10644 381 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 POU3F2P20265 443 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 PITPNBP48739 271 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 CD97P48960 835 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 CLDN17P56750 224 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 RAC3P60763 192 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 MFGE8Q08431 387 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 FOXL2NBQ6ZUU3 175 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 DEFB124Q8NES8 71 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 IL17RDQ8NFM7 739 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 OR2AJ1Q8NGZ0 328 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 TMEM54Q969K7 222 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 SMAD5Q99717 465 aaKnown RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 WACQ9BTA9 647 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 ZNF703Q9H7S9 590 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 B3GAT2Q9NPZ5 323 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 CYB5R1Q9UHQ9 305 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 HHLA2Q9UM44 414 aa11.72□□□□□ -0.53
CPSF4-206ENST00000441580 AK6Q9Y3D8 172 aaKnown RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 MRPS18BQ9Y676 258 aaKnown RBP11.72□□□□□ -0.53
CPSF4-206ENST00000441580 GPR179Q6PRD1 2367 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 TNFSF11O14788 317 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 TPPPO94811 219 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 MPZL1O95297 269 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 WNT11O96014 354 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 OPN1LWP04000 364 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 ENPP1P22413 925 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 MAP2K3P46734 347 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 SOX2P48431 317 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 MMP16P51512 607 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 SUCLG1P53597 346 aaKnown RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 RRADP55042 308 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 TMEM244Q5VVB8 128 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 CARD17Q5XLA6 110 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 IGF2-ASQ6U949 168 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 CCBE1Q6UXH8 406 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 CREB3L2Q70SY1 520 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 LRRTM1Q86UE6 522 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 LINC00346Q8IVM7 164 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 WDFY1Q8IWB7 410 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 TMEM123Q8N131 208 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 ZNF433Q8N7K0 673 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 OR2M7Q8NG81 312 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 OR6N1Q8NGY5 312 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 OR2V1Q8NHB1 315 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 ENKURQ8TC29 256 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 SNRNP27Q8WVK2 155 aaKnown RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 NKD1Q969G9 470 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 MCHR2Q969V1 340 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 CPNE4Q96A23 557 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 RFT1Q96AA3 541 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 SLAMF6Q96DU3 332 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 OR2M2Q96R28 347 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 STMN3Q9NZ72 180 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 GLTPQ9NZD2 209 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 GDF2Q9UK05 429 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 OR52A1Q9UKL2 312 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 FOXJ3Q9UPW0 622 aa11.71□□□□□ -0.53
CPSF4-206ENST00000441580 KLF13Q9Y2Y9 288 aaPredicted RBP11.71□□□□□ -0.53
CPSF4-206ENST00000441580 A0A0J9YW62 118 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 LOC107986453A0A1B0GWG9 222 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 CDRT15L2A8MXV6 281 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 EIF1AYO14602 144 aaKnown RBP11.7□□□□□ -0.54
CPSF4-206ENST00000441580 RAMP1O60894 148 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 SLC43A1O75387 559 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 NEURL1O76050 574 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 QDPRP09417 244 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 MSR1P21757 451 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 GUCA1AP43080 201 aaPredicted RBP11.7□□□□□ -0.54
CPSF4-206ENST00000441580 ZNF84P51523 738 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 LSM6P62312 80 aaKnown RBP11.7□□□□□ -0.54
CPSF4-206ENST00000441580 GRB2P62993 217 aaKnown RBP11.7□□□□□ -0.54
CPSF4-206ENST00000441580 P2RY14Q15391 338 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 OR1C1Q15619 314 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 TAB1Q15750 504 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 SPATC1Q76KD6 591 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 GDPD3Q7L5L3 318 aa11.7□□□□□ -0.54
CPSF4-206ENST00000441580 YRDCQ86U90 279 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms