RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 EPHA6Q9UF33 1036 aa6.84□□□□□ -1.32
HDAC9-214ENST00000441542 A0A087X0M5 115 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 A0A1B0GX30 115 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 TERTO14746 1132 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PHOX2AO14813 284 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 OGG1O15527 345 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 ERCC1P07992 297 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 HOXB5P09067 269 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 JMJD7P0C870 316 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PRLHRP49683 370 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 ACTA2P62736 377 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 POLR2LP62875 67 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 ACTG2P63267 376 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 SPOCK1Q08629 439 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 ELAVL2Q12926 359 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 ASTLQ6HA08 431 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 HIST2H3AQ71DI3 136 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PARGQ86W56 976 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 TMEM25Q86YD3 366 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 OR7G2Q8NG99 324 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 RNASE11Q8TAA1 199 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 KIRREL1Q96J84 757 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 CWH43Q9H720 699 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 METTL8Q9H825 291 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 BCL2L10Q9HD36 194 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 LANCL2Q9NS86 450 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 SLC22A13Q9Y226 551 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 VSIG4Q9Y279 399 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 TCAPO15273 167 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 KLF4O43474 513 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 XRCC3O43542 346 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 C1QL1O75973 258 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PRH1P02810 166 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 CPMP14384 443 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 SLC6A6P31641 620 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 GLP1RP43220 463 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 FKBP1BP68106 108 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 EXOSC7Q15024 291 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 IRF4Q15306 451 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 TRMT12Q53H54 448 aaKnown RBP6.83□□□□□ -1.32
HDAC9-214ENST00000441542 SLC24A5Q71RS6 500 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 THNSL2Q86YJ6 484 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 ARRDC1Q8N5I2 433 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 CSNK1A1LQ8N752 337 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 COX18Q8N8Q8 333 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 VN1R2Q8NFZ6 395 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 OR56A1Q8NGH5 318 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 OR14K1Q8NGZ2 314 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 METTL21AQ8WXB1 218 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 TMEM41AQ96HV5 264 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 CYYR1Q96J86 154 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PRSS16Q9NQE7 514 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 INPP5EQ9NRR6 644 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 MARCH5Q9NX47 278 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PISDQ9UG56 409 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 FBXL21Q9UKT6 434 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 YIPF1Q9Y548 306 aa6.83□□□□□ -1.32
HDAC9-214ENST00000441542 PLXNB2O15031 1838 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 DNAH14Q0VDD8 3507 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 MYOFQ9NZM1 2061 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 LOC390937A0A1W2PQ73 354 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ATXN7O15265 892 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-214ENST00000441542 EOMESO95936 686 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 WNT11O96014 354 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 IFNA6P05013 189 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 F13BP05160 661 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ITGA5P08648 1049 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 OR2T7P0C7T2 308 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 FHITP49789 147 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ZNF84P51523 738 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 DCDP81605 110 aaKnown RBP6.82□□□□□ -1.32
HDAC9-214ENST00000441542 MEF2DQ14814 521 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 MOGAT2Q3SYC2 334 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 Q499Y3 187 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 RNASE10Q5GAN6 216 aaKnown RBP6.82□□□□□ -1.32
HDAC9-214ENST00000441542 MTSS1LQ765P7 747 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 TMCO2Q7Z6W1 182 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-214ENST00000441542 RTN4RL2Q86UN3 420 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ZNF584Q8IVC4 421 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 TRAM1L1Q8N609 369 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ZSCAN4Q8NAM6 433 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-214ENST00000441542 OR2A12Q8NGT7 310 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 OR2T27Q8NH04 317 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 OR8D1Q8WZ84 308 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 GTF3AQ92664 365 aaKnown RBP6.82□□□□□ -1.32
HDAC9-214ENST00000441542 FAM3DQ96BQ1 224 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 MISP3Q96FF7 219 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 GPR61Q9BZJ8 451 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ZDHHC5Q9C0B5 715 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 SEC61A2Q9H9S3 476 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 PLSCR4Q9NRQ2 329 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 RNF186Q9NXI6 227 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 OR5AC2Q9NZP5 309 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 ZDHHC8Q9ULC8 765 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 CDH23Q9H251 3354 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 MT-ND4LP03901 98 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 EDN3P14138 238 aa6.82□□□□□ -1.32
HDAC9-214ENST00000441542 FABP4P15090 132 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms