RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 STOMP27105 288 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 EVX1P49640 407 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 DSCR9P59020 149 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 SYT9Q86SS6 491 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 MAPK1IP1LQ8NDC0 245 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 CANT1Q8WVQ1 401 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 POM121Q96HA1 1249 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 POM121L2Q96KW2 1035 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 SYT3Q9BQG1 590 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 EGLN3Q9H6Z9 239 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 FZR1Q9UM11 496 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 COA3Q9Y2R0 106 aaPredicted RBP20.34■□□□□ 0.85
VARS-217ENST00000440048 FKBP7Q9Y680 259 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 CDH10Q9Y6N8 788 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 LOC100509620A0A075B734 347 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 DHRS12A0PJE2 317 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 HEXAP06865 529 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 IGFBP1P08833 259 aaPredicted RBP20.33■□□□□ 0.85
VARS-217ENST00000440048 HIST1H1CP16403 213 aaKnown RBP20.33■□□□□ 0.85
VARS-217ENST00000440048 PCSK6P29122 969 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 FLOT2Q14254 428 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 MICAQ29983 383 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 LEG1Q6P5S2 330 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 Q71RC1 249 aaPredicted RBP20.33■□□□□ 0.85
VARS-217ENST00000440048 LRP11Q86VZ4 500 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 JAZF1Q86VZ6 243 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 GLB1L2Q8IW92 636 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 ZCCHC24Q8N2G6 241 aaKnown RBP20.33■□□□□ 0.85
VARS-217ENST00000440048 AQP11Q8NBQ7 271 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 OR4K13Q8NH42 304 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 CADM1Q9BY67 442 aaKnown RBP20.33■□□□□ 0.85
VARS-217ENST00000440048 DYNLRB1Q9NP97 96 aa20.33■□□□□ 0.85
VARS-217ENST00000440048 GSC2O15499 205 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 IDH3BO43837 385 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 MPZL1O95297 269 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 CCNOP22674 350 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 GDI2P50395 445 aaKnown RBP20.32■□□□□ 0.84
VARS-217ENST00000440048 UCP2P55851 309 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 OTPQ5XKR4 325 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 RGS7BPQ6MZT1 257 aaPredicted RBP20.32■□□□□ 0.84
VARS-217ENST00000440048 ZNF774Q6NX45 483 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 ALDH16A1Q8IZ83 802 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 TSSK2Q96PF2 358 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 SNX18Q96RF0 628 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 NMNAT3Q96T66 252 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 WACQ9BTA9 647 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 RAB1BQ9H0U4 201 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 POMPQ9Y244 141 aa20.32■□□□□ 0.84
VARS-217ENST00000440048 JMJD1CQ15652 2540 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 C5orf49A4QMS7 147 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 DCTN6O00399 190 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 SYNGR3O43761 229 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 RENP00797 406 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 CST1P01037 141 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 LCKP06239 509 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 ADRA2AP08913 450 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 HOXB4P17483 251 aaPredicted RBP20.31■□□□□ 0.84
VARS-217ENST00000440048 NOS3P29474 1203 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 CRABP1P29762 137 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 RAD52P43351 418 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 ERVS71-1P61550 626 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 CLEC12AQ5QGZ9 265 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 RPL13AP3Q6NVV1 102 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 RASSF6Q6ZTQ3 369 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 SPATA24Q86W54 205 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 OR52L1Q8NGH7 329 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 FAM168AQ92567 244 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 PLA2G12AQ9BZM1 189 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 BCL2L14Q9BZR8 327 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 IL20Q9NYY1 176 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 MYEF2Q9P2K5 600 aaKnown RBP20.31■□□□□ 0.84
VARS-217ENST00000440048 DUSP13Q9UII6 198 aa20.31■□□□□ 0.84
VARS-217ENST00000440048 IGLV1-36A0A0B4J1U3 117 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 CSF3P09919 207 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 WNT5AP41221 380 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 LSM6P62312 80 aaKnown RBP20.3■□□□□ 0.84
VARS-217ENST00000440048 SLC35F1Q5T1Q4 408 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 DNM1P34Q6PK57 102 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 OR6V1Q8N148 313 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 SDR9C7Q8NEX9 313 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 OR8D4Q8NGM9 314 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 C10orf105Q8TEF2 133 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 C11orf40Q8WZ69 217 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 DGCR6LQ9BY27 220 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 SRA1Q9HD15 236 aaKnown RBP20.3■□□□□ 0.84
VARS-217ENST00000440048 REV1Q9UBZ9 1251 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 B9D1Q9UPM9 204 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 ABCA1O95477 2261 aa20.3■□□□□ 0.84
VARS-217ENST00000440048 FN1P02751 2386 aaKnown RBP20.3■□□□□ 0.84
VARS-217ENST00000440048 TCRBV3S1A0A5B6 114 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 M0R233 179 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 BHLHE40O14503 412 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 GPANK1O95872 356 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 ZNF250P15622 560 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 HOXB6P17509 224 aaKnown RBP20.29■□□□□ 0.84
VARS-217ENST00000440048 ALDH3B1P43353 468 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 CENPAP49450 140 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 SCRN3Q0VDG4 424 aa20.29■□□□□ 0.84
VARS-217ENST00000440048 DBPQ10586 325 aaPredicted RBP20.29■□□□□ 0.84
VARS-217ENST00000440048 GK3PQ14409 553 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms