RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PATE4P0C8F1 98 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 NR2C1P13056 603 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 NOS3P29474 1203 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 SDHAP31040 664 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 CDAP32320 146 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 Q5PR19 223 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 SLC35F1Q5T1Q4 408 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 C10orf128Q5T292 105 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 PRSS57Q6UWY2 283 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 SKA3Q8IX90 412 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 CCDC36Q8IYA8 594 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 IGFBPL1Q8WX77 278 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 SH3GL3Q99963 347 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 KCNS3Q9BQ31 491 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 TVP23BQ9NYZ1 205 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 CISD1Q9NZ45 108 aaKnown RBP15.36■□□□□ 0.05
CCDC188-201ENST00000439765 CRNNQ9UBG3 495 aaPredicted RBP15.36■□□□□ 0.05
CCDC188-201ENST00000439765 LAMP3Q9UQV4 416 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 ABCA2Q9BZC7 2435 aa15.36■□□□□ 0.05
CCDC188-201ENST00000439765 SURF4O15260 269 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 UBL3O95164 117 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 CLIC3O95833 236 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 OR8G3PP0DMU2 310 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 CBR1P16152 277 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 HOXB4P17483 251 aaPredicted RBP15.35■□□□□ 0.05
CCDC188-201ENST00000439765 ZNF133P52736 654 aaPredicted RBP15.35■□□□□ 0.05
CCDC188-201ENST00000439765 CDC42P60953 191 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 NAAAQ02083 359 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 SNAPC1Q16533 368 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 ZNF362Q5T0B9 420 aaPredicted RBP15.35■□□□□ 0.05
CCDC188-201ENST00000439765 ZNF691Q5VV52 312 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 USP51Q70EK9 711 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 DEPDC4Q8N2C3 294 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 MOV10Q9HCE1 1003 aaKnown RBP15.35■□□□□ 0.05
CCDC188-201ENST00000439765 B3GNT2Q9NY97 397 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 UGT2A1Q9Y4X1 527 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 LRRC42Q9Y546 428 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 ATP23Q9Y6H3 246 aa15.35■□□□□ 0.05
CCDC188-201ENST00000439765 E7EQL1 145 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 FARS2O95363 451 aaKnown RBP15.34■□□□□ 0.05
CCDC188-201ENST00000439765 RAB36O95755 333 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 CRYAAP02489 173 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 SOD3P08294 240 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 GNAO1P09471 354 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 INHBBP09529 407 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 HIST1H1CP16403 213 aaKnown RBP15.34■□□□□ 0.05
CCDC188-201ENST00000439765 ARR3P36575 388 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 EFNB1P98172 346 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 IL18R1Q13478 541 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 THEM4Q5T1C6 240 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 SLC25A47Q6Q0C1 308 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 LRRC18Q8N456 261 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 FGFBP3Q8TAT2 258 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 FAM81AQ8TBF8 368 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 SMAP2Q8WU79 429 aaPredicted RBP15.34■□□□□ 0.05
CCDC188-201ENST00000439765 TMEM171Q8WVE6 324 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 RBP7Q96R05 134 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 APOL4Q9BPW4 351 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 PRRG3Q9BZD7 231 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 CMC2Q9NRP2 79 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 KLHL21Q9UJP4 597 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 HIVEP2P31629 2446 aa15.34■□□□□ 0.05
CCDC188-201ENST00000439765 A0A1W2PPL8 197 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 PRSS37A4D1T9 235 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 CALCRP30988 508 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 C3orf36Q3SXR2 165 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 SLC16A14Q7RTX9 510 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 FAM169BQ8N8A8 192 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 OR52E2Q8NGJ4 325 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 OR4K13Q8NH42 304 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 FNDC8Q8TC99 324 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 TRUB1Q8WWH5 349 aaKnown RBP15.33■□□□□ 0.05
CCDC188-201ENST00000439765 UBE2FQ969M7 185 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 NABP1Q96AH0 204 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 GSX2Q9BZM3 304 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 SYT4Q9H2B2 425 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 IMPAD1Q9NX62 359 aa15.33■□□□□ 0.05
CCDC188-201ENST00000439765 SLC22A23A1A5C7 686 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 DENRO43583 198 aaKnown RBP15.33■□□□□ 0.04
CCDC188-201ENST00000439765 PRKYO43930 277 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 TMCC2O75069 709 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 IFNGP01579 166 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 DANCRP0C864 163 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 PAX7P23759 505 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 CDKN2AP42771 156 aaKnown RBP15.33■□□□□ 0.04
CCDC188-201ENST00000439765 ISL1P61371 349 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 RAB1AP62820 205 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 MRPS34P82930 218 aaKnown RBP15.33■□□□□ 0.04
CCDC188-201ENST00000439765 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC188-201ENST00000439765 PTCHD4Q6ZW05 846 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 ADCK1Q86TW2 530 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 TCEANCQ8N8B7 351 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 SETD9Q8NE22 299 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 OR8J1Q8NGP2 316 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 PERPQ96FX8 193 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 PLEKHA8Q96JA3 519 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 FOXN4Q96NZ1 517 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 DDOQ99489 341 aa15.33■□□□□ 0.04
CCDC188-201ENST00000439765 ANKRD60Q9BZ19 345 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms