RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 WACQ9BTA9 647 aa18.18■□□□□ 0.5
CHD3-204ENST00000439235 ZNF416Q9BWM5 594 aa18.18■□□□□ 0.5
CHD3-204ENST00000439235 CDCA4Q9BXL8 241 aa18.18■□□□□ 0.5
CHD3-204ENST00000439235 PHF3Q92576 2039 aaKnown RBP18.17■□□□□ 0.5
CHD3-204ENST00000439235 CIB4A0PJX0 185 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 CST2P09228 141 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 C21orf33P30042 268 aaPredicted RBP18.17■□□□□ 0.5
CHD3-204ENST00000439235 CHRNB4P30926 498 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 UQCRFS1P47985 274 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 PCBD1P61457 104 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 AQP6Q13520 282 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 ENDOGQ14249 297 aaKnown RBP18.17■□□□□ 0.5
CHD3-204ENST00000439235 OTPQ5XKR4 325 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 LUZP2Q86TE4 346 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 RELL2Q8NC24 303 aaPredicted RBP18.17■□□□□ 0.5
CHD3-204ENST00000439235 ASB17Q8WXJ9 295 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 HTRA1Q92743 480 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 ERGIC3Q9Y282 383 aa18.17■□□□□ 0.5
CHD3-204ENST00000439235 A0A1W2PQL4 384 aaPredicted RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 A8MXE2 369 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 MYL12BO14950 172 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 LRRTM2O43300 516 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 HTR1AP08908 422 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 ALOX5APP20292 161 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 RPS27P42677 84 aaKnown RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 EIF2B1Q14232 305 aaKnown RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 ZNF474Q6S9Z5 364 aaPredicted RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 SLC16A14Q7RTX9 510 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 DPPA2Q7Z7J5 298 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 LRRC18Q8N456 261 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 ZNF433Q8N7K0 673 aaPredicted RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 SMAP2Q8WU79 429 aaPredicted RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 NANOS1Q8WY41 292 aaKnown RBP18.16■□□□□ 0.5
CHD3-204ENST00000439235 CCDC120Q96HB5 630 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 ERVK13-1Q9NX77 482 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 GALNT8Q9NY28 637 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 ASH2LQ9UBL3 628 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 CYB5R1Q9UHQ9 305 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 COPS3Q9UNS2 423 aa18.16■□□□□ 0.5
CHD3-204ENST00000439235 SPENQ96T58 3664 aaKnown RBP18.15■□□□□ 0.5
CHD3-204ENST00000439235 LYZL6O75951 148 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 PSKH1P11801 424 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 HOXC12P31275 282 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 ACTA2P62736 377 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 ACTG2P63267 376 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 ADORA2A-AS1P86434 159 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 MVKQ03426 396 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 GALEQ14376 348 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 TBCEQ15813 527 aaPredicted RBP18.15■□□□□ 0.5
CHD3-204ENST00000439235 SLC25A35Q3KQZ1 300 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 SLC36A2Q495M3 483 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 OR7E24Q6IFN5 339 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 DCXRQ7Z4W1 244 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 SYT9Q86SS6 491 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 CXorf67Q86X51 503 aaPredicted RBP18.15■□□□□ 0.5
CHD3-204ENST00000439235 ZGRF1Q86YA3 2104 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 LIX1LQ8IVB5 337 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 LINC00346Q8IVM7 164 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 SPARTQ8N0X7 666 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 C17orf78Q8N4C9 275 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 KLHL36Q8N4N3 616 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 THEM6Q8WUY1 208 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 BCL2L2Q92843 193 aaPredicted RBP18.15■□□□□ 0.5
CHD3-204ENST00000439235 BOD1Q96IK1 185 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 SH3GL3Q99963 347 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 ALG8Q9BVK2 526 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 MRPS26Q9BYN8 205 aaKnown RBP18.15■□□□□ 0.5
CHD3-204ENST00000439235 C1orf198Q9H425 327 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 VCX3AQ9NNX9 186 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 ELOVL5Q9NYP7 299 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 JKAMPQ9P055 326 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 ERRFI1Q9UJM3 462 aaPredicted RBP18.15■□□□□ 0.5
CHD3-204ENST00000439235 LHFPL6Q9Y693 200 aa18.15■□□□□ 0.5
CHD3-204ENST00000439235 A0A096LPE4 126 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 A0A1W2PPZ6 126 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 RAD51DO75771 328 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 ADRA2AP08913 450 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 LIMS3P0CW19 117 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 LIMS4P0CW20 117 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 HOXB1P14653 301 aaPredicted RBP18.14■□□□□ 0.49
CHD3-204ENST00000439235 ETV1P50549 477 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 HCCSP53701 268 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 TUBA4AP68366 448 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 ZNF85Q03923 595 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 EGR3Q06889 387 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 SCRN3Q0VDG4 424 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 IRF3Q14653 427 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 GABRA6Q16445 453 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 TBRG1Q3YBR2 411 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 SFRP5Q5T4F7 317 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 KCTD18Q6PI47 426 aaPredicted RBP18.14■□□□□ 0.49
CHD3-204ENST00000439235 TMPRSS11AQ6ZMR5 421 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 LHFPL3Q86UP9 236 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 SKA3Q8IX90 412 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 CCDC36Q8IYA8 594 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 GJC3Q8NFK1 279 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 OR52N5Q8NH56 324 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 SNX33Q8WV41 574 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 ABHD6Q9BV23 337 aa18.14■□□□□ 0.49
CHD3-204ENST00000439235 MND1Q9BWT6 205 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms