RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RAB5BP61020 215 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 EBPQ15125 230 aaKnown RBP12.08□□□□□ -0.47
ACTN1-204ENST00000438964 PDGFRLQ15198 375 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 MICBQ29980 383 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 SECTM1Q8WVN6 248 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 MRGPRFQ96AM1 343 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 CMTM3Q96MX0 182 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 ELOVL3Q9HB03 270 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 OR5AC2Q9NZP5 309 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 DAPP1Q9UN19 280 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 C19orf53Q9UNZ5 99 aaPredicted RBP12.08□□□□□ -0.47
ACTN1-204ENST00000438964 B9D1Q9UPM9 204 aa12.08□□□□□ -0.47
ACTN1-204ENST00000438964 A0A087WV62 115 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 A0A1B0GTI1 187 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 SLC31A1O15431 190 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 CDC40O60508 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 CSRP1P21291 193 aaKnown RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 RORAP35398 523 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 GPR143P51810 404 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 MFGE8Q08431 387 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 IRF4Q15306 451 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF684Q5T5D7 378 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 C5orf46Q6UWT4 87 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 BAP18Q8IXM2 172 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 NECAB3Q96P71 396 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 SLC27A6Q9Y2P4 619 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 SRPX2O60687 465 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 LRP3O75074 770 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 CD8AP01732 235 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 SLC35G6P0C7Q6 338 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF735P0CB33 412 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 ADH5P11766 374 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 CMPK1P30085 196 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 HRH1P35367 487 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 S100A10P60903 97 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 S100A12P80511 92 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 DPTQ07507 201 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 FBXO42Q6P3S6 717 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 PAPD4Q6PIY7 484 aaKnown RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 OR2I1PQ8NGU4 316 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 MARCH1Q8TCQ1 289 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 RHOVQ96L33 236 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
ACTN1-204ENST00000438964 MRPS33Q9Y291 106 aaKnown RBP12.08□□□□□ -0.48
ACTN1-204ENST00000438964 LOC101059948A0A1B0GTJ6 334 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 A0A1W2PP55 124 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 HCRTR1O43613 425 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 MED6O75586 246 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 FGF18O76093 207 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 WISP1O95388 367 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 SPARCP09486 303 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 TACSTD2P09758 323 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 RNF224P0DH78 156 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 RPS4Y1P22090 263 aaKnown RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 CD96P40200 585 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 LPAR6P43657 344 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 ADPRHP54922 357 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 DCDP81605 110 aaKnown RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 GGTLC2Q14390 218 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 MST1LQ2TV78 715 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 TTLL10Q6ZVT0 673 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 OR2L8Q8NGY9 312 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 RSPRY1Q96DX4 576 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 SLC41A2Q96JW4 573 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 PITHD1Q9GZP4 211 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 EPHA6Q9UF33 1036 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 ATXN7L1Q9ULK2 861 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 LOC100289279A0A1B0GTE1 492 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 EFCAB7A8K855 629 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 C1orf196B1AJZ1 125 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 C1QTNF3-AMACRE9PGA6 284 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 M0R036 132 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 OIP5O43482 229 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 B3GALT2O43825 422 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 OR10H2O60403 315 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 ABHD16AO95870 558 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 CSTAP01040 98 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 TLX1P31314 330 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 HSD17B2P37059 387 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 HNRNPA1L2Q32P51 320 aaKnown RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 ITPRIPL2Q3MIP1 535 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 C1QL3Q5VWW1 255 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 USP53Q70EK8 1073 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 ZNF584Q8IVC4 421 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 METTL27Q8N6F8 245 aaPredicted RBP12.07□□□□□ -0.48
ACTN1-204ENST00000438964 CDRT4Q8N9R6 151 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 MFSD9Q8NBP5 474 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 SLC2A4RGQ9NR83 387 aa12.07□□□□□ -0.48
ACTN1-204ENST00000438964 CLN5O75503 358 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 MPZL1O95297 269 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 CISD3P0C7P0 127 aa12.06□□□□□ -0.48
ACTN1-204ENST00000438964 TPT1P13693 172 aaKnown RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-204ENST00000438964 GNB3P16520 340 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms