RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 POU2F3Q9UKI9 436 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 ROS1P08922 2347 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 AKAP6Q13023 2319 aa14.02□□□□□ -0.17
SNRPB-202ENST00000438552 IGHV2OR16-5A0A0B4J2B6 119 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 ZAR1LA6NP61 321 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 C12orf71A8MTZ7 269 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 HLA-DQA2P01906 255 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 CRYAAP02489 173 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 TFP02787 698 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 HMGN1P05114 100 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 ANPEPP15144 967 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 POLR2IP36954 125 aaKnown RBP14.01□□□□□ -0.17
SNRPB-202ENST00000438552 ALDH3A2P51648 485 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 SLC25A1P53007 311 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 HSF2Q03933 536 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 KCNMB1Q16558 191 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 SLX4IPQ5VYV7 408 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 PAMR1Q6UXH9 720 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 EME1Q96AY2 570 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 PLEKHA8Q96JA3 519 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 OR2H1Q9GZK4 316 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 WNT5BQ9H1J7 359 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 HINT3Q9NQE9 182 aaKnown RBP14.01□□□□□ -0.17
SNRPB-202ENST00000438552 TVP23BQ9NYZ1 205 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 ASH2LQ9UBL3 628 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 ENOPH1Q9UHY7 261 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 FBXL3Q9UKT7 428 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 ATP23Q9Y6H3 246 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 PLCE1Q9P212 2302 aa14.01□□□□□ -0.17
SNRPB-202ENST00000438552 TVP23AA6NH52 213 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 PRR23D1E9PI22 279 aaPredicted RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 SERPINA5P05154 406 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 PRR23D2P0DMB1 279 aaPredicted RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 CCL2P13500 99 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 PAICSP22234 425 aaKnown RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 APEX1P27695 318 aaKnown RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 PCBD1P61457 104 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 LSM6P62312 80 aaKnown RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 PSG4Q00888 419 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 TEKQ02763 1124 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 AQP6Q13520 282 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 C12orf73Q69YU5 71 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 ZNF774Q6NX45 483 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 PLBD1Q6P4A8 553 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 CDH24Q86UP0 819 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 DEPDC4Q8N2C3 294 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 CPEB3Q8NE35 698 aaKnown RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 SLC30A7Q8NEW0 376 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 BBS1Q8NFJ9 593 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 OR10H5Q8NGA6 315 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 OR6K6Q8NGW6 343 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 FBXW5Q969U6 566 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 SLC29A1Q99808 456 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 TEX12Q9BXU0 123 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 MRPL22Q9NWU5 206 aaKnown RBP14□□□□□ -0.17
SNRPB-202ENST00000438552 PLEKHA6Q9Y2H5 1048 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 ORC6Q9Y5N6 252 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 LHFPL6Q9Y693 200 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 CSMD1Q96PZ7 3565 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 DSCAMO60469 2012 aa14□□□□□ -0.17
SNRPB-202ENST00000438552 IQCMA0A1B0GVH7 501 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 E7EQL1 145 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 DOK2O60496 412 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 PSKH1P11801 424 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 PLP2Q04941 152 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 TRIP10Q15642 601 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 SNAPC1Q16533 368 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 ZIK1Q3SY52 487 aaPredicted RBP13.99□□□□□ -0.17
SNRPB-202ENST00000438552 CORO6Q6QEF8 472 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 CPOQ8IVL8 374 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 LINC00346Q8IVM7 164 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 PAQR4Q8N4S7 273 aaPredicted RBP13.99□□□□□ -0.17
SNRPB-202ENST00000438552 PRRG3Q9BZD7 231 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 OR51V1Q9H2C8 321 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 CISD1Q9NZ45 108 aaKnown RBP13.99□□□□□ -0.17
SNRPB-202ENST00000438552 ST6GALNAC2Q9UJ37 374 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 TIMM10BQ9Y5J6 103 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 COMMD3-BMI1R4GMX3 469 aa13.99□□□□□ -0.17
SNRPB-202ENST00000438552 SPG11Q96JI7 2443 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 PRKYO43930 277 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 PEX2P28328 305 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 RPS27P42677 84 aaKnown RBP13.98□□□□□ -0.17
SNRPB-202ENST00000438552 RAD23AP54725 363 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 HGFACQ04756 655 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 SCRN3Q0VDG4 424 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 LRRC36Q1X8D7 754 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 TBC1D28Q2M2D7 210 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 LINC01590Q5TEZ4 76 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 LPCAT4Q643R3 524 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 KRT80Q6KB66 452 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 C20orf204Q6ZNR8 217 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 ZBTB49Q6ZSB9 765 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 CXXC5Q7LFL8 322 aaKnown RBP13.98□□□□□ -0.17
SNRPB-202ENST00000438552 SYT9Q86SS6 491 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 ZNF611Q8N823 705 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 ZNF511Q8NB15 262 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 PTP4A1Q93096 173 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 MBOAT4Q96T53 435 aa13.98□□□□□ -0.17
SNRPB-202ENST00000438552 C1orf198Q9H425 327 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms