RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 HLA-DQA2P01906 255 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4L2P0CJ85 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4L3P0CJ86 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4L4P0CJ87 422 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4L5P0CJ88 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4L6P0CJ89 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4L7P0CJ90 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 CALCBP10092 127 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 STARP49675 285 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 CFHR1Q03591 330 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 SMCO1Q147U7 214 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 C1orf189Q5VU69 101 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 NHLRC1Q6VVB1 395 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 OR5T2Q8NGG2 359 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 C4orf45Q96LM5 186 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 ELOVL3Q9HB03 270 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 MRPL22Q9NWU5 206 aaKnown RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DUX4Q9UBX2 424 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 MIOXQ9UGB7 285 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 A0A1B0GVI7 797 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 A0A1W2PR77 199 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 LILRA5A6NI73 299 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 GLSO94925 669 aaPredicted RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 MPZL1O95297 269 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 LY86O95711 162 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 TGM6O95932 706 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 IGF2P01344 180 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 HIST1H2ABP04908 130 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 CXCR1P25024 350 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 CD38P28907 300 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 OR1D5P58170 312 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 OC90Q02509 493 aaPredicted RBP9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 ACKR1Q16570 336 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 OR5M10Q6IEU7 315 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 C5orf46Q6UWT4 87 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 HIST3H2AQ7L7L0 130 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 WDFY1Q8IWB7 410 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 OTOSQ8NHW6 89 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 HIST1H2ACQ93077 130 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 LAT2Q9GZY6 243 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DNTTIP1Q9H147 329 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 DCAF16Q9NXF7 216 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 KIF25Q9UIL4 384 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 GTF2A1LQ9UNN4 478 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 AUP1Q9Y679 476 aa9.38□□□□□ -0.91
CLSTN1-203ENST00000435891 KIF26BQ2KJY2 2108 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 PYCARD-AS1I3L0S3 204 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 RP2O75695 350 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 RENP00797 406 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 RAB40ALP0C0E4 278 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 CTLA4P16410 223 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 IL11P20809 199 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 CCKBRP32239 447 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 GALNSP34059 522 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MELKQ14680 651 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 RAB40AQ8WXH6 277 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 CCNL2Q96S94 520 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 GAL3ST1Q99999 423 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 SLITRK2Q9H156 845 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 ASH2LQ9UBL3 628 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 ZNF69Q9UC07 566 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 HLA-DOBP13765 273 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 IL12BP29460 328 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MFGE8Q08431 387 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 NSDHLQ15738 373 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 SGCAQ16586 387 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 C2orf68Q2NKX9 166 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 OLFML2AQ68BL7 652 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 GLDNQ6ZMI3 551 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 LANCL3Q6ZV70 420 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 GPR148Q8TDV2 347 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 SFT2D1Q8WV19 159 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 OR1F2PQ96R84 312 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 IGHV3-20A0A0C4DH32 117 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 A0A1B0GUH1 482 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 ACOT7O00154 380 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 TSPAN2O60636 221 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 SLC16A7O60669 478 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 VSIG10L2P0DP72 767 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MAPK3P27361 379 aaPredicted RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 RBMS2Q15434 407 aaKnown RBP9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 EMC4Q5J8M3 183 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 GKN2Q86XP6 184 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 BVESQ8NE79 360 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 TSTD1Q8NFU3 115 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 METTL21AQ8WXB1 218 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
CLSTN1-203ENST00000435891 MBD2Q9UBB5 411 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms