RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CHST4Q8NCG5 386 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZPLD1Q8TCW7 415 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 NUDCD2Q8WVJ2 157 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 GLYATL1Q969I3 302 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ACTRT3Q9BYD9 372 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 MRPS33Q9Y291 106 aaKnown RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF443Q9Y2A4 671 aaPredicted RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF736B4DX44 427 aaPredicted RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PHOX2AO14813 284 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 OR2T7P0C7T2 308 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 FAM157CP0CG43 387 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ACRP10323 421 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 DDTP30046 118 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PPM1AP35813 382 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 VASPP50552 380 aaPredicted RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ACTA2P62736 377 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ACTG2P63267 376 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF616Q08AN1 781 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 SGCBQ16585 318 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 VWA2Q5GFL6 755 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF793Q6ZN11 406 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 OR2T27Q8NH04 317 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ALX4Q9H161 411 aaPredicted RBP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 CRLF2Q9HC73 371 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 FBXO34Q9NWN3 711 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 ZDHHC8Q9ULC8 765 aa6.78□□□□□ -1.32
CPSF6-202ENST00000435070 PUS1Q9Y606 427 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPSF6-202ENST00000435070 IFNA10P01566 189 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 ITGB2P05107 769 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 CTSLP07711 333 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 NDUFS1P28331 727 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 PCP4P48539 62 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 STARD6P59095 220 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 EIF5AP63241 154 aaKnown RBP6.77□□□□□ -1.32
CPSF6-202ENST00000435070 MEF2DQ14814 521 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 RAB30Q15771 203 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 RPL7L1Q6DKI1 246 aaKnown RBP6.77□□□□□ -1.32
CPSF6-202ENST00000435070 ZSCAN4Q8NAM6 433 aaPredicted RBP6.77□□□□□ -1.32
CPSF6-202ENST00000435070 RAB7BQ96AH8 199 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 PTCHD1Q96NR3 888 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 CCNL2Q96S94 520 aaPredicted RBP6.77□□□□□ -1.32
CPSF6-202ENST00000435070 CWH43Q9H720 699 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 ADAP2Q9NPF8 381 aa6.77□□□□□ -1.32
CPSF6-202ENST00000435070 TMEM235A6NFC5 223 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 IFITM10A6NMD0 228 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 PEX12O00623 359 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 BPNT1O95861 308 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 WNT11O96014 354 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 OR13C7P0DN81 318 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 CALCBP10092 127 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SLC25A4P12235 298 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 PI3P19957 117 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF84P51523 738 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 S100A10P60903 97 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 HTRA3P83110 453 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 MYO7AQ13402 2215 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SQSTM1Q13501 440 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 DUSP5Q16690 384 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 GUK1Q16774 197 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF529Q6P280 563 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 Q6ZRG5 221 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM150AQ86TG1 271 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 OR2L3Q8NG85 312 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 OR2AJ1Q8NGZ0 328 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SLC25A43Q8WUT9 341 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 HIST1H2AAQ96QV6 131 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 PRDM13Q9H4Q3 707 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 DOK5Q9P104 306 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 A0A1W2PR48 441 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 DBX1A6NMT0 343 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ADAP1O75689 374 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ERCC1P07992 297 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 GJA4P35212 333 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF674Q2M3X9 581 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SLC22A6Q4U2R8 563 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 C22orf39Q6P5X5 142 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 IL34Q6ZMJ4 242 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 REC114Q7Z4M0 266 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 UBE3DQ7Z6J8 389 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 NAXEQ8NCW5 288 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 OR5AK2Q8NH90 309 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 ADAD1Q96M93 576 aaKnown RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SGIP1Q9BQI5 828 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 PHPT1Q9NRX4 125 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 CACFD1Q9UGQ2 172 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 VSIG4Q9Y279 399 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 J3QR89 54 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 NME2P1O60361 137 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 IFNA17P01571 189 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 QDPRP09417 244 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SLC9A3R2Q15599 337 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM244Q5VVB8 128 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 UNQ9370/PRO34162Q6UXP9 181 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 HIST2H3AQ71DI3 136 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 RANBP3LQ86VV4 465 aaPredicted RBP6.77□□□□□ -1.33
CPSF6-202ENST00000435070 FOXN4Q96NZ1 517 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 LYSMD1Q96S90 227 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 INTS14Q96SY0 518 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 OPA3Q9H6K4 179 aa6.77□□□□□ -1.33
CPSF6-202ENST00000435070 SRA1Q9HD15 236 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms