RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 FOLR3P41439 243 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 RPS27P42677 84 aaKnown RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 MYBPHQ13203 477 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 DCAF12Q5T6F0 453 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 ZNF704Q6ZNC4 412 aaPredicted RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 LRRC69Q6ZNQ3 347 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 NDUFAF7Q7L592 441 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 CATSPERDQ86XM0 798 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 GLB1L2Q8IW92 636 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 UEVLDQ8IX04 471 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 DTX3Q8N9I9 347 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 SMIM4Q8WVI0 70 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 TSEN15Q8WW01 171 aaKnown RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 TAAR9Q96RI9 348 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 SMAD5Q99717 465 aaKnown RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 NPAS1Q99742 590 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 ACTR6Q9GZN1 396 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 ANKRD10Q9NXR5 420 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 KLHL13Q9P2N7 655 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 CKLFQ9UBR5 152 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 STEAP1Q9UHE8 339 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 NUFIP1Q9UHK0 495 aaKnown RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 ING1Q9UK53 422 aaPredicted RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 POU2F3Q9UKI9 436 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 FOXJ3Q9UPW0 622 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 DHDHQ9UQ10 334 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 N6AMT1Q9Y5N5 214 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 ALG5Q9Y673 324 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 CHCHD2Q9Y6H1 151 aaPredicted RBP11.47□□□□□ -0.57
DDX56-204ENST00000431640 R4GMQ9 66 aa11.47□□□□□ -0.57
DDX56-204ENST00000431640 A0A1B0GTH9 108 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 MEGF11A6BM72 1044 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 NAP1L6A6NFF2 107 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 COX6A1P12074 109 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ICAM2P13598 275 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 DCTDP32321 178 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 MAGEB1P43366 347 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 SSR4P51571 173 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 RAG2P55895 527 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 BIDP55957 195 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 GABREP78334 506 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 SLC35A1P78382 337 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 EIF3IQ13347 325 aaKnown RBP11.46□□□□□ -0.57
DDX56-204ENST00000431640 SNTB2Q13425 540 aaKnown RBP11.46□□□□□ -0.57
DDX56-204ENST00000431640 TMEM225Q6GV28 225 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 NHLRC1Q6VVB1 395 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 PLCZ1Q86YW0 608 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 WDSUB1Q8N9V3 476 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 SYNPRQ8TBG9 265 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 FCAMRQ8WWV6 532 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ORAI1Q96D31 301 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 HAVCR1Q96D42 359 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 OXGR1Q96P68 337 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ZPBPQ9BS86 351 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ANGPTL4Q9BY76 406 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ASCL3Q9NQ33 180 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ING3Q9NXR8 418 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 OR5V1Q9UGF6 321 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 WASF3Q9UPY6 502 aa11.46□□□□□ -0.57
DDX56-204ENST00000431640 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.58
DDX56-204ENST00000431640 NSG1A0A0A6YYJ2 146 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 A0A1W2PQ72 361 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 KRT33AO76009 404 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 TNFSF15O95150 251 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 MAS1P04201 325 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 ISG15P05161 165 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 CD3GP09693 182 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 ARSBP15848 533 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 ADRA2CP18825 462 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 SPINK2P20155 84 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 DGCR2P98153 550 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 TMEM244Q5VVB8 128 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.45□□□□□ -0.58
DDX56-204ENST00000431640 SIAH3Q8IW03 269 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 TCTE3Q8IZS6 198 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 UPRTQ96BW1 309 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
DDX56-204ENST00000431640 FOXN4Q96NZ1 517 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 MRPL13Q9BYD1 178 aaKnown RBP11.45□□□□□ -0.58
DDX56-204ENST00000431640 HHLA2Q9UM44 414 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 LRP12Q9Y561 859 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 HS3ST3B1Q9Y662 390 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 A0A0B4J293 547 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 CDRT15L2A8MXV6 281 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 TLX3O43711 291 aaPredicted RBP11.45□□□□□ -0.58
DDX56-204ENST00000431640 PNPP00491 289 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 IGHG1P01857 330 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 TCRBP04435 133 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 H2BFMP0C1H6 154 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 NR2C1P13056 603 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 ACHEP22303 614 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 LAP3P28838 519 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 CLRN1P58418 232 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 RRAS2P62070 204 aaPredicted RBP11.45□□□□□ -0.58
DDX56-204ENST00000431640 TMEM69Q5SWH9 247 aa11.45□□□□□ -0.58
DDX56-204ENST00000431640 GLT8D1Q68CQ7 371 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms