RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 FAM27BQ5VT28 67 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 C1orf146Q5VVC0 180 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 FOXL2NBQ6ZUU3 175 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 SLCO4A1Q96BD0 722 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 NMNAT3Q96T66 252 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 DGCR6LQ9BY27 220 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 GRIP2Q9C0E4 1043 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 NUAK2Q9H093 628 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 EMC7Q9NPA0 242 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 POLE4Q9NR33 117 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
PTCD1-204ENST00000430982 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
PTCD1-204ENST00000430982 SPEF1Q9Y4P9 236 aa13.13□□□□□ -0.31
PTCD1-204ENST00000430982 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
PTCD1-204ENST00000430982 IDH3BO43837 385 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 TIPRLO75663 272 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 PTHP01270 115 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 SCG5P05408 212 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 IGFBP1P08833 259 aaPredicted RBP13.12□□□□□ -0.31
PTCD1-204ENST00000430982 ZNF35P13682 527 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 GSTM3P21266 225 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 NR4A1P22736 598 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 APLNRP35414 380 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 PCBD1P61457 104 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 ENDOGQ14249 297 aaKnown RBP13.12□□□□□ -0.31
PTCD1-204ENST00000430982 ADIPOQQ15848 244 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 TBC1D28Q2M2D7 210 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 OTPQ5XKR4 325 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 UGT2A3Q6UWM9 527 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 TMEM179BQ7Z7N9 219 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 PAPD5Q8NDF8 572 aaKnown RBP13.12□□□□□ -0.31
PTCD1-204ENST00000430982 SDR9C7Q8NEX9 313 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 OR52E2Q8NGJ4 325 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 OR8D4Q8NGM9 314 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 OR1J2Q8NGS2 313 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 AKR7LQ8NHP1 331 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 FEVQ99581 238 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 NIPSNAP1Q9BPW8 284 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 ZNF416Q9BWM5 594 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 TSSK6Q9BXA6 273 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 PLA2G12AQ9BZM1 189 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 ZNF442Q9H7R0 627 aa13.12□□□□□ -0.31
PTCD1-204ENST00000430982 GDF2Q9UK05 429 aaPredicted RBP13.12□□□□□ -0.31
PTCD1-204ENST00000430982 C12orf71A8MTZ7 269 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 CD5LO43866 347 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 GPRIN2O60269 458 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 NDUFS7O75251 213 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 BMP4P12644 408 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 APEX1P27695 318 aaKnown RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 CRABP1P29762 137 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 SNRPD2P62316 118 aaKnown RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 PSG4Q00888 419 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 MST1LQ2TV78 715 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 GLB1L2Q8IW92 636 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 PAQR4Q8N4S7 273 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 CPEB3Q8NE35 698 aaKnown RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 WNT5BQ9H1J7 359 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 OR51B6Q9H340 312 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 FN3KQ9H479 309 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 RPRD1BQ9NQG5 326 aaKnown RBP13.11□□□□□ -0.31
PTCD1-204ENST00000430982 ARMC1Q9NVT9 282 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 IL20Q9NYY1 176 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 B9D1Q9UPM9 204 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 CMAHPQ9Y471 501 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 TIMM10BQ9Y5J6 103 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 PMF1-BGLAPU3KQ54 211 aa13.11□□□□□ -0.31
PTCD1-204ENST00000430982 ARRDC5A6NEK1 342 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 B9A039 149 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 DCTN6O00399 190 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 EBAG9O00559 213 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 BHLHE40O14503 412 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 MPZL1O95297 269 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 GPANK1O95872 356 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 IGHV4-39P01824 125 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 CCNOP22674 350 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 GDI2P50395 445 aaKnown RBP13.1□□□□□ -0.31
PTCD1-204ENST00000430982 DBPQ10586 325 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-204ENST00000430982 CCNIQ14094 377 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 RAB35Q15286 201 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 SWI5Q1ZZU3 235 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 ASRGL1Q7L266 308 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 HS3ST5Q8IZT8 346 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 PLK3Q9H4B4 646 aa13.1□□□□□ -0.31
PTCD1-204ENST00000430982 BARX1Q9HBU1 254 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms