RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ABHD4Q8TB40 342 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 CCL17Q92583 94 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 TMEM120AQ9BXJ8 343 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 OR2J1Q9GZK6 312 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 WNT5BQ9H1J7 359 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 NDRG4Q9ULP0 352 aaKnown RBP12.64□□□□□ -0.39
MSH5-208ENST00000429846 CACNG2Q9Y698 323 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 ZSCAN5BA6NJL1 495 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 PPIAL4DF5H284 164 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 PIP5K1CO60331 668 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 IFI30P13284 250 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 MSR1P21757 451 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 TUBG1P23258 451 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 LAP3P28838 519 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 KDELR2P33947 212 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 PPP1CBP62140 327 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 CYBRD1Q53TN4 286 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 TREML1Q86YW5 311 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 OFCC1Q8IZS5 231 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 PCYOX1LQ8NBM8 494 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 OR2T12Q8NG77 320 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 C10orf82Q8WW14 230 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 LZICQ8WZA0 190 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 GCDHQ92947 438 aaPredicted RBP12.63□□□□□ -0.39
MSH5-208ENST00000429846 TUBG2Q9NRH3 451 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 GID8Q9NWU2 228 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 A4GNTQ9UNA3 340 aa12.63□□□□□ -0.39
MSH5-208ENST00000429846 ISPDA4D126 451 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 C12orf71A8MTZ7 269 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 RGS9O75916 674 aaPredicted RBP12.62□□□□□ -0.39
MSH5-208ENST00000429846 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
MSH5-208ENST00000429846 COX5BP10606 129 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 SLC9A3P48764 834 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 CTXN1P60606 82 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 SELENOWP63302 87 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 MTX3Q5HYI7 312 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 TMEM255AQ5JRV8 349 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 LRRC75AQ8NAA5 344 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 FAM156AQ8NDB6 213 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 NPEPL1Q8NDH3 523 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 TPD52L3Q96J77 140 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 C4orf45Q96LM5 186 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 KLHL21Q9UJP4 597 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
MSH5-208ENST00000429846 A0A1W2PPL8 197 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 ELOVL7A1L3X0 281 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 FOXH1O75593 365 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 ABHD16AO95870 558 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 NGFP01138 241 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 GSTM3P21266 225 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 KLF10Q13118 480 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 ENDOGQ14249 297 aaKnown RBP12.61□□□□□ -0.39
MSH5-208ENST00000429846 TRAM2Q15035 370 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 ZNF774Q6NX45 483 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 ARPINQ7Z6K5 226 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 OAFQ86UD1 273 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 NRMQ8IXM6 262 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 MICU2Q8IYU8 434 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 RNF113BQ8IZP6 322 aaKnown RBP12.61□□□□□ -0.39
MSH5-208ENST00000429846 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 C3orf56Q8N813 242 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 COG8Q96MW5 612 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 FNDC11Q9BVV2 318 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 C7orf69Q9H7B7 122 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 POLE4Q9NR33 117 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 TBCCD1Q9NVR7 557 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
MSH5-208ENST00000429846 NPTNQ9Y639 398 aa12.61□□□□□ -0.39
MSH5-208ENST00000429846 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 AHCYL1O43865 530 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 TIMM8AO60220 97 aaPredicted RBP12.6□□□□□ -0.39
MSH5-208ENST00000429846 FSHBP01225 129 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 IFNW1P05000 195 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 ADRA2CP18825 462 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 TNFRSF1AP19438 455 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 TNFSF4P23510 183 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 FPR2P25090 351 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 TNFAIP6P98066 277 aaPredicted RBP12.6□□□□□ -0.39
MSH5-208ENST00000429846 PRKCDQ05655 676 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 SCRN3Q0VDG4 424 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 IGFN1Q86VF2 1251 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 SPICQ8N5J4 248 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 OR51A7Q8NH64 312 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 SGMS2Q8NHU3 365 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
MSH5-208ENST00000429846 ACOT11Q8WXI4 607 aaPredicted RBP12.6□□□□□ -0.39
MSH5-208ENST00000429846 POP5Q969H6 163 aaKnown RBP12.6□□□□□ -0.39
MSH5-208ENST00000429846 SAMD8Q96LT4 415 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 SLC6A7Q99884 636 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 NDEL1Q9GZM8 345 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms