RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ALOX5APP20292 161 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 ZNF273Q14593 569 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 CDH26Q8IXH8 852 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 ZBTB8AQ96BR9 441 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 TOE1Q96GM8 510 aaKnown RBP11.26□□□□□ -0.61
CDH3-202ENST00000429102 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 ELL3Q9HB65 397 aaPredicted RBP11.26□□□□□ -0.61
CDH3-202ENST00000429102 PHF3Q92576 2039 aaKnown RBP11.26□□□□□ -0.61
CDH3-202ENST00000429102 GNB3P16520 340 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 MST1P26927 711 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 RAG2P55895 527 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 EXOSC6Q5RKV6 272 aaKnown RBP11.26□□□□□ -0.61
CDH3-202ENST00000429102 WBP2NLQ6ICG8 309 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 LHFPL5Q8TAF8 219 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 CTHRC1Q96CG8 243 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 SLC41A2Q96JW4 573 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 C5orf34Q96MH7 638 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 SELENOIQ9C0D9 397 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 SEMA6CQ9H3T2 930 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 FBXL21Q9UKT6 434 aa11.26□□□□□ -0.61
CDH3-202ENST00000429102 IFNA6P05013 189 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 CD2P06729 351 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 CSF1P09603 554 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 HTR2CP28335 458 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 RBM34P42696 430 aaKnown RBP11.25□□□□□ -0.61
CDH3-202ENST00000429102 PRSS12P56730 875 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 IL13RA1P78552 427 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 DHRS2Q13268 280 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 ZNF584Q8IVC4 421 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 FGGYQ96C11 551 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 NPAS1Q99742 590 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 SYNDIG1Q9H7V2 258 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 KIF25Q9UIL4 384 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 CTDSPLO15194 276 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 RD3LP0DJH9 198 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 CALCBP10092 127 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 ARL4DP49703 201 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 TMPPEQ6ZT21 453 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 RNF144BQ7Z419 303 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 OR52H1Q8NGJ2 320 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 C4orf45Q96LM5 186 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 ZNF426Q9BUY5 554 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 ZNF416Q9BWM5 594 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 BANF2Q9H503 90 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 NPTNQ9Y639 398 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
CDH3-202ENST00000429102 FOXS1O43638 330 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 ZNF205O95201 554 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 DLX2Q07687 328 aaPredicted RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 SLC36A1Q7Z2H8 476 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 SLC22A18ASQ8N1D0 253 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 SPICQ8N5J4 248 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 OR13C9Q8NGT0 318 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 OR10R2Q8NGX6 335 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 MRPS24Q96EL2 167 aaKnown RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 UBQLN4Q9NRR5 601 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 KIAA1549LQ6ZVL6 1849 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 ZNF823P16415 610 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 ITGA3P26006 1051 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 AKT2P31751 481 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 CEBPGP53567 150 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 DEFB133Q30KQ1 61 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 RNASE10Q5GAN6 216 aaKnown RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 ANKRD16Q6P6B7 361 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 TMED6Q8WW62 240 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 HRH4Q9H3N8 390 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 GDE1Q9NZC3 331 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 TMEM269A0A1B0GVZ9 245 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 ARPC3O15145 178 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 PPP1R1AQ13522 171 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 NSDHLQ15738 373 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 ELFN2Q5R3F8 820 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 DCXRQ7Z4W1 244 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 TRAPPC6BQ86SZ2 158 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 C19orf47Q8N9M1 422 aaKnown RBP11.24□□□□□ -0.61
CDH3-202ENST00000429102 LMX1AQ8TE12 382 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 SEH1LQ96EE3 360 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 TMEM41AQ96HV5 264 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 CST11Q9H112 138 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 MBD2Q9UBB5 411 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 FAM96BQ9Y3D0 163 aa11.24□□□□□ -0.61
CDH3-202ENST00000429102 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SDCBPO00560 298 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 EN2P19622 333 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ADAD2Q8NCV1 583 aaKnown RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR5M9Q8NGP3 310 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR2I1PQ8NGU4 316 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ADAMTS18Q8TE60 1221 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ZNF587Q96SQ5 575 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 ABHD6Q9BV23 337 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 POTEKPQ9BYX7 375 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms