RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 CATR1Q13166 79 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 HSPB2Q16082 182 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 OR4C3Q8NH37 302 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 FAM3DQ96BQ1 224 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 PPA2Q9H2U2 334 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 LOC100289279A0A1B0GTE1 492 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 SPAARA0A1B0GVQ0 90 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 C5orf49A4QMS7 147 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 ALG1L2C9J202 215 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 BET1O15155 118 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 MT-ND4P03905 459 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 TFAP2AP05549 437 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPL28-202ENST00000426763 SLC22A25Q6T423 547 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 OR5AS1Q8N127 324 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 PARP16Q8N5Y8 322 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 ZNF764Q96H86 408 aaPredicted RBP12.58□□□□□ -0.4
RPL28-202ENST00000426763 ATF6BQ99941 703 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 PDCD1LG2Q9BQ51 273 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 PLCXD1Q9NUJ7 323 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 F5H5P2 479 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 CAV2P51636 162 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 IL13RA1P78552 427 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 LTC4SQ16873 150 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 GLIPR1L1Q6UWM5 242 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 ZNF679Q8IYX0 411 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 EMG1Q92979 244 aaKnown RBP12.58□□□□□ -0.4
RPL28-202ENST00000426763 SIRT5Q9NXA8 310 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 RCE1Q9Y256 329 aa12.58□□□□□ -0.4
RPL28-202ENST00000426763 TRPM6Q9BX84 2022 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 A0A0B4J2E0 115 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 A0A1B0GX12 115 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 XRCC2O43543 280 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 ETV5P41161 510 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 ETV1P50549 477 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 ZNF133P52736 654 aaPredicted RBP12.57□□□□□ -0.4
RPL28-202ENST00000426763 RAB31Q13636 194 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 ZNF74Q16587 644 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 SPAG16Q8N0X2 631 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 NUBPLQ8TB37 319 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 OR51E1Q8TCB6 317 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 KISS1RQ969F8 398 aaPredicted RBP12.57□□□□□ -0.4
RPL28-202ENST00000426763 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 GUSBP08236 651 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 FAM219BQ5XKK7 198 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 SYS1Q8N2H4 156 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 OR52H1Q8NGJ2 320 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 H1FXQ92522 213 aaKnown RBP12.57□□□□□ -0.4
RPL28-202ENST00000426763 NOX3Q9HBY0 568 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 CYB5BO43169 146 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 SHBQ15464 509 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 ZBTB8BQ8NAP8 495 aaPredicted RBP12.57□□□□□ -0.4
RPL28-202ENST00000426763 NOXO1Q8NFA2 376 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 OR51A2Q8NGJ7 313 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 OR5M9Q8NGP3 310 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 GNRHR2Q96P88 292 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 NKX3-1Q99801 234 aaPredicted RBP12.57□□□□□ -0.4
RPL28-202ENST00000426763 A0A1W2PQ09 198 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 OR6C6A6NF89 314 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 RAF1P04049 648 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 NR4A2P43354 598 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 RBP2P50120 134 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 C21orf58P58505 322 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 DEFA5Q01523 94 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 MYBPHQ13203 477 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 ANGPTL5Q86XS5 388 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 A4GNTQ9UNA3 340 aa12.57□□□□□ -0.4
RPL28-202ENST00000426763 A0A1W2PPV9 198 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 JUNBP17275 347 aaPredicted RBP12.56□□□□□ -0.4
RPL28-202ENST00000426763 RAD52P43351 418 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 GPR119Q8TDV5 335 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 OIT3Q8WWZ8 545 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 KTI12Q96EK9 354 aaPredicted RBP12.56□□□□□ -0.4
RPL28-202ENST00000426763 GPR173Q9NS66 373 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 IFNA1P01562 189 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 IFNA2P01563 188 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 GIFP27352 417 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 HCCSP53701 268 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 EDDM3BP56851 147 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 TSSK2Q96PF2 358 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 NRTNQ99748 197 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 BARHL1Q9BZE3 327 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 MMP28Q9H239 520 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 DNAJB12Q9NXW2 375 aaKnown RBP12.56□□□□□ -0.4
RPL28-202ENST00000426763 SULT1C4O75897 302 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 SLC35A2P78381 396 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 RNPS1Q15287 305 aaKnown RBP12.56□□□□□ -0.4
RPL28-202ENST00000426763 MSMO1Q15800 293 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 APOOLQ6UXV4 268 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 OR51D1Q8NGF3 324 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 POLDIP2Q9Y2S7 368 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 UBL3O95164 117 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 CNR1P21554 472 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 GALNSP34059 522 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 RGS19P49795 217 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 LUZP4Q9P127 313 aa12.56□□□□□ -0.4
RPL28-202ENST00000426763 UBQLN2Q9UHD9 624 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms