RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 AGAP7PQ5VUJ5 663 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 ZIC4Q8N9L1 334 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 OR10AC1Q8NH08 325 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 OR2V1Q8NHB1 315 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 AGAP4Q96P64 663 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 ZCCHC4Q9H5U6 513 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 MUC6Q6W4X9 2439 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 DMXL1Q9Y485 3027 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 NOTOA8MTQ0 251 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 NKX2-8O15522 239 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 ZNF254O75437 659 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 ZNF432O94892 652 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 HPNP05981 417 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 OCM2P0CE71 109 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 OCMP0CE72 109 aaPredicted RBP23.53■■□□□ 1.36
LDB1-202ENST00000425280 SLC2A2P11168 524 aaPredicted RBP23.53■■□□□ 1.36
LDB1-202ENST00000425280 RRADP55042 308 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 CNIH2Q6PI25 160 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 SF3B5Q9BWJ5 86 aaKnown RBP23.53■■□□□ 1.36
LDB1-202ENST00000425280 TTTY12Q9BZ98 90 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 EMC7Q9NPA0 242 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 C14orf119Q9NWQ9 140 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 GLTPQ9NZD2 209 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 SLC22A13Q9Y226 551 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 AK6Q9Y3D8 172 aaKnown RBP23.53■■□□□ 1.36
LDB1-202ENST00000425280 OR5H15A6NDH6 313 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 CXCL13O43927 109 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 SRSF10O75494 262 aaKnown RBP23.52■■□□□ 1.36
LDB1-202ENST00000425280 SP1P08047 785 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 PRKAR1AP10644 381 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 SOX8P57073 446 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 CATSPERDQ86XM0 798 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 TMEM123Q8N131 208 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 OR10D3Q8NH80 312 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 RNF133Q8WVZ7 376 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 TMEM54Q969K7 222 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 FBXL3Q9UKT7 428 aa23.52■■□□□ 1.36
LDB1-202ENST00000425280 CNOT1A5YKK6 2376 aaKnown RBP23.52■■□□□ 1.36
LDB1-202ENST00000425280 CELA3AP09093 270 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 AZGP1P25311 298 aaKnown RBP23.52■■□□□ 1.35
LDB1-202ENST00000425280 MAPK3P27361 379 aaPredicted RBP23.52■■□□□ 1.35
LDB1-202ENST00000425280 SOX2P48431 317 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 CSNK1A1P48729 337 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 EVX1P49640 407 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 XKRXQ6PP77 449 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 IL17RDQ8NFM7 739 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 OR51A4Q8NGJ6 313 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 PPP1R14AQ96A00 147 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 SOSTQ9BQB4 213 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 SLC25A18Q9H1K4 315 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 GTF2A1LQ9UNN4 478 aa23.52■■□□□ 1.35
LDB1-202ENST00000425280 LINC01387J3KSC0 135 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 GPR171O14626 319 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 NME2P1O60361 137 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 SLC19A2O60779 497 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 EPXP11678 715 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 NME2P22392 152 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 PHYHD1Q5SRE7 291 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 SLC25A25Q6KCM7 469 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 DEGS2Q6QHC5 323 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 SLC22A16Q86VW1 577 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 GPR148Q8TDV2 347 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 DLL3Q9NYJ7 618 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 LHFPL6Q9Y693 200 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 R4GMQ9 66 aa23.51■■□□□ 1.35
LDB1-202ENST00000425280 FAM166BA8MTA8 275 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 CDK2AP1O14519 115 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 NR2C1P13056 603 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 EIF1AXP47813 144 aaKnown RBP23.5■■□□□ 1.35
LDB1-202ENST00000425280 GALNTL5Q7Z4T8 443 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 OR8H2Q8N162 312 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 OR6N1Q8NGY5 312 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 HTRA1Q92743 480 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 GFI1Q99684 422 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 ADAM30Q9UKF2 790 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 KLF13Q9Y2Y9 288 aaPredicted RBP23.5■■□□□ 1.35
LDB1-202ENST00000425280 TRBV5-7A0A0A0MS05 114 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 ATF1P18846 271 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 MADCAM1Q13477 382 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 KCNMB1Q16558 191 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 ZNF544Q6NX49 715 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 MINDY2Q8NBR6 621 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 SLAMF6Q96DU3 332 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 TIGARQ9NQ88 270 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 CENPMQ9NSP4 180 aa23.5■■□□□ 1.35
LDB1-202ENST00000425280 ZFHX2Q9C0A1 2572 aaPredicted RBP23.49■■□□□ 1.35
LDB1-202ENST00000425280 H3BSH0 61 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 ELK1P19419 428 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 WT1P19544 449 aaPredicted RBP23.49■■□□□ 1.35
LDB1-202ENST00000425280 MAGEA5P43359 124 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 SELENOPP49908 381 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 TMEM251Q8N6I4 163 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 OR10S1Q8NGN2 331 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 ROBO4Q8WZ75 1007 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 C1orf198Q9H425 327 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 FAIMQ9NVQ4 179 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 EMC9Q9Y3B6 208 aa23.49■■□□□ 1.35
LDB1-202ENST00000425280 PDCD5O14737 125 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 PAHP00439 452 aa23.48■■□□□ 1.35
LDB1-202ENST00000425280 H2BFMP0C1H6 154 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms