RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 VKORC1Q9BQB6 163 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 RHNO1Q9BSD3 238 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 MROQ9BYG7 248 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 C1orf198Q9H425 327 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 POLE4Q9NR33 117 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 MRPL22Q9NWU5 206 aaKnown RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 ZNF629Q9UEG4 869 aaPredicted RBP9.11□□□□□ -0.95
MDC1-205ENST00000425072 CLEC2DQ9UHP7 191 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 PROCRQ9UNN8 238 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 FREM1Q5H8C1 2179 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 CACNA1CQ13936 2221 aa9.11□□□□□ -0.95
MDC1-205ENST00000425072 TLN1Q9Y490 2541 aaKnown RBP9.1□□□□□ -0.95
MDC1-205ENST00000425072 IGKV1D-43A0A0B4J1Z2 117 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 METTL15A6NJ78 407 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 EIF4E1BA6NMX2 242 aaKnown RBP9.1□□□□□ -0.95
MDC1-205ENST00000425072 J3QLW9 94 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 SELENOFO60613 162 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 APOL3O95236 402 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 MPZL1O95297 269 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 KRT8P05787 483 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 CST2P09228 141 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 GAAP10253 952 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 CD8BP10966 210 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ZNF19P17023 458 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 PAX7P23759 505 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 MAP2K4P45985 399 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ALDH3B2P48448 385 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 GBX2P52951 348 aaPredicted RBP9.1□□□□□ -0.95
MDC1-205ENST00000425072 HCCSP53701 268 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ACSM1Q08AH1 577 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 GPR50Q13585 617 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 EIF2B1Q14232 305 aaKnown RBP9.1□□□□□ -0.95
MDC1-205ENST00000425072 P2RY6Q15077 328 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 C1QTNF12Q5T7M4 302 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 OR7E24Q6IFN5 339 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ZNF544Q6NX49 715 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ZNF322Q6U7Q0 402 aaPredicted RBP9.1□□□□□ -0.95
MDC1-205ENST00000425072 PCSK4Q6UW60 755 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 PLXDC2Q6UX71 529 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 Q6ZT83 130 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ZNF627Q7L945 461 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 GPR141Q7Z602 305 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ALDH16A1Q8IZ83 802 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 SLC22A24Q8N4F4 322 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 GATAD2BQ8WXI9 593 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 RND1Q92730 232 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 STARD4Q96DR4 205 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 TBX5Q99593 518 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 MGLLQ99685 303 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 FOXB1Q99853 325 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 SFXN3Q9BWM7 321 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 HDHD5Q9BXW7 423 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 PIGMQ9H3S5 423 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 CYB5R1Q9UHQ9 305 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 POLR1DQ9Y2S0 133 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 UGT2A1Q9Y4X1 527 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 TIMM10BQ9Y5J6 103 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 FAM215AQ9Y5M1 114 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 ATMQ13315 3056 aa9.1□□□□□ -0.95
MDC1-205ENST00000425072 NCOA6Q14686 2063 aaPredicted RBP9.09□□□□□ -0.95
MDC1-205ENST00000425072 TRGV8A0A0C4DH27 118 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 GPANK1O95872 356 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 APOC1P02654 83 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 CDAP32320 146 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ARR3P36575 388 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 TAS2R43P59537 309 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 SIRPAP78324 504 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ARF1P84077 181 aaKnown RBP9.09□□□□□ -0.95
MDC1-205ENST00000425072 BDH1Q02338 343 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ROM1Q03395 351 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ZNF85Q03923 595 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ECH1Q13011 328 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 TAF13Q15543 124 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 TIGD6Q17RP2 521 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 SLC36A2Q495M3 483 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 CDONQ4KMG0 1287 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 CCDC58Q4VC31 144 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 PRR30Q53SZ7 412 aaPredicted RBP9.09□□□□□ -0.95
MDC1-205ENST00000425072 ARMCX4Q5H9R4 360 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 XAF1Q6GPH4 301 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ANKRD16Q6P6B7 361 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ZNF813Q6ZN06 617 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 FAM220AQ7Z4H9 259 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 KRT77Q7Z794 578 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.09□□□□□ -0.95
MDC1-205ENST00000425072 ZNF679Q8IYX0 411 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 GCNT2Q8N0V5 402 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 FOXN4Q96NZ1 517 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 USB1Q9BQ65 265 aaKnown RBP9.09□□□□□ -0.95
MDC1-205ENST00000425072 ZNF649Q9BS31 505 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 ABHD6Q9BV23 337 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 NIPAL2Q9H841 368 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 TRIM36Q9NQ86 728 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 GALNT8Q9NY28 637 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 TAS2R16Q9NYV7 291 aa9.09□□□□□ -0.95
MDC1-205ENST00000425072 MALT1Q9UDY8 824 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms