RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 OAFQ86UD1 273 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 IGFN1Q86VF2 1251 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 RNF113BQ8IZP6 322 aaKnown RBP9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 CLDN22Q8N7P3 220 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 OR4M2Q8NGB6 313 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 OR13C2Q8NGS9 318 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 OR51A7Q8NH64 312 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 RP9Q8TA86 221 aaKnown RBP9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ABHD4Q8TB40 342 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 SLC25A40Q8TBP6 338 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 KLF14Q8TD94 323 aaPredicted RBP9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ACOT11Q8WXI4 607 aaPredicted RBP9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 RAB1CQ92928 201 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 WACQ9BTA9 647 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 OR2J1Q9GZK6 312 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 EGLN1Q9GZT9 426 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ANKRD19PQ9H560 264 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 OCEL1Q9H607 264 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 CCDC134Q9H6E4 229 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ELOVL3Q9HB03 270 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ARMCX1Q9P291 453 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 RHCGQ9UBD6 479 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 NDRG4Q9ULP0 352 aaKnown RBP9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 WIPI2Q9Y4P8 454 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ZSCAN5BA6NJL1 495 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 CXCR6O00574 342 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 NDUFAB1O14561 156 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 GSTA4O15217 222 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 SPRY3O43610 288 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 IGHV2-5P01817 119 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 GSTM3P21266 225 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 YAP1P46937 504 aaKnown RBP9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 PPP1CBP62140 327 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 LIPEQ05469 1076 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 SCRN3Q0VDG4 424 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 FHL1Q13642 323 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 ENDOGQ14249 297 aaKnown RBP9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF774Q6NX45 483 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 FAHD2BQ6P2I3 314 aaPredicted RBP9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF730Q6ZMV8 503 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 MBOAT2Q6ZWT7 520 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 ZER1Q7Z7L7 766 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 CYP4Z1Q86W10 505 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 SLC15A3Q8IY34 581 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 POU5F2Q8N7G0 328 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 NPEPL1Q8NDH3 523 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 SEMA6DQ8NFY4 1073 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF418Q8TF45 676 aaPredicted RBP9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 FAHD2AQ96GK7 314 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 HSH2DQ96JZ2 352 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 DIRC2Q96SL1 478 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 G6PC2Q9NQR9 355 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 POLE4Q9NR33 117 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 GRHPRQ9UBQ7 328 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 ZDHHC8Q9ULC8 765 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 TMEM5Q9Y2B1 443 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 SNX13Q9Y5W8 968 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 TANC2Q9HCD6 1990 aa9.82□□□□□ -0.84
SQSTM1-203ENST00000422245 A0A087WUU8 490 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 H7C1C5 153 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 J3KTA2 159 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 J3QLI3 93 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 XKRYO14609 159 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 FFAR1O14842 300 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 AHCYL1O43865 530 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 PRSS23O95084 383 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 MPZL1O95297 269 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 ABHD16AO95870 558 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 CD55P08174 381 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 CD14P08571 375 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 COX5BP10606 129 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 FUT4P22083 530 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 TUBG1P23258 451 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 RPL4P36578 427 aaKnown RBP9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 GPR4P46093 362 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 SLC7A2P52569 658 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 LCN6P62502 163 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 MTX3Q5HYI7 312 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 TMPRSS11FQ6ZWK6 438 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 FKBP9P1Q75LS8 142 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 CBLL1Q75N03 491 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 CCL17Q92583 94 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 C4orf45Q96LM5 186 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 GAL3ST1Q99999 423 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 HOPXQ9BPY8 73 aaPredicted RBP9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 TUBG2Q9NRH3 451 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 CACNG2Q9Y698 323 aa9.81□□□□□ -0.84
SQSTM1-203ENST00000422245 WNK2Q9Y3S1 2297 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 PRSS37A4D1T9 235 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 NME4O00746 187 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 CDC42EP2O14613 210 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 PLPP2O43688 288 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 TIMM8AO60220 97 aaPredicted RBP9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 DOK2O60496 412 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 CCDC22O60826 627 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 UBOX5O94941 541 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 VENTXO95231 258 aa9.8□□□□□ -0.84
SQSTM1-203ENST00000422245 SERPINA1P01009 418 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms