RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PSG4Q00888 419 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 CRMP1Q14194 572 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 ENDOGQ14249 297 aaKnown RBP13.66□□□□□ -0.22
BRAT1-202ENST00000421712 TBC1D28Q2M2D7 210 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 TMEM236Q5W0B7 351 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 KRT80Q6KB66 452 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 ACSM5Q6NUN0 579 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 OR9Q1Q8NGQ5 310 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 ZNF75AQ96N20 296 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 OR2H1Q9GZK4 316 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 C1orf198Q9H425 327 aa13.66□□□□□ -0.22
BRAT1-202ENST00000421712 SMPD2O60906 423 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 MITFO75030 526 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 SOD3P08294 240 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 ZNF823P16415 610 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 PAICSP22234 425 aaKnown RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 IGFBP5P24593 272 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 APEX1P27695 318 aaKnown RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 APOBEC3AP31941 199 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 LSM6P62312 80 aaKnown RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 CDK5Q00535 292 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 TEKQ02763 1124 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 SCRN3Q0VDG4 424 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 SNTB2Q13425 540 aaKnown RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 DAG1Q14118 895 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 MEP1BQ16820 701 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 DEFB113Q30KQ7 82 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 ZNF362Q5T0B9 420 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-202ENST00000421712 SYT9Q86SS6 491 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 ZBTB46Q86UZ6 589 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 ZNF584Q8IVC4 421 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 MUC15Q8N387 334 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 OR51L1Q8NGJ5 315 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 WACQ9BTA9 647 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 GABARAPL1Q9H0R8 117 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 CXorf56Q9H5V9 222 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 CMC2Q9NRP2 79 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 TVP23BQ9NYZ1 205 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 LRBAP50851 2863 aa13.65□□□□□ -0.22
BRAT1-202ENST00000421712 TACC2O95359 2948 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 HRNRQ86YZ3 2850 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-202ENST00000421712 FAM183AA6NL82 134 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 GYPBP06028 91 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ZNF35P13682 527 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 STOMP27105 288 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 TTKP33981 857 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 GDI2P50395 445 aaKnown RBP13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ART1P52961 327 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ESRRGP62508 458 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 HGFACQ04756 655 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 AQP6Q13520 282 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 SNAPC1Q16533 368 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 KDM4DQ6B0I6 523 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ZNF774Q6NX45 483 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ZNF544Q6NX49 715 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 PARP8Q8N3A8 854 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
BRAT1-202ENST00000421712 OR6K6Q8NGW6 343 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 OR2AJ1Q8NGZ0 328 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 DDOQ99489 341 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 RBM4BQ9BQ04 359 aaKnown RBP13.64□□□□□ -0.23
BRAT1-202ENST00000421712 RBM4Q9BWF3 364 aaKnown RBP13.64□□□□□ -0.23
BRAT1-202ENST00000421712 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 OR51B6Q9H340 312 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 MED20Q9H944 212 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 CA10Q9NS85 328 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 BEX4Q9NWD9 120 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ASH2LQ9UBL3 628 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ENOPH1Q9UHY7 261 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 ORC6Q9Y5N6 252 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 POLQO75417 2590 aa13.64□□□□□ -0.23
BRAT1-202ENST00000421712 C5orf49A4QMS7 147 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 TVP23AA6NH52 213 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-202ENST00000421712 SURF4O15260 269 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 SGCEO43556 437 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 DOK2O60496 412 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 DANCRP0C864 163 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-202ENST00000421712 GAAP10253 952 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 CLUP10909 449 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 SPI1P17947 270 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 NR4A1P22736 598 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 FMO3P31513 532 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 THBS4P35443 961 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 SLC25A1P53007 311 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 PTGES3Q15185 160 aaKnown RBP13.63□□□□□ -0.23
BRAT1-202ENST00000421712 KCNMB1Q16558 191 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 NUP37Q8NFH4 326 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 GJC3Q8NFK1 279 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 SLC26A10Q8NG04 563 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 MBD6Q96DN6 1003 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 CIB1Q99828 191 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 OSBPL10Q9BXB5 764 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 OR51V1Q9H2C8 321 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 RIBC2Q9H4K1 309 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 SLC25A19Q9HC21 320 aa13.63□□□□□ -0.23
BRAT1-202ENST00000421712 PLEK2Q9NYT0 353 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms