RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 METTL15P1P0C7V9 234 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 HIST1H1CP16403 213 aaKnown RBP11.32□□□□□ -0.6
CLCN4-203ENST00000421085 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CMC2Q9NRP2 79 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 DNAJC25-GNG10A0A024R161 153 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 RFPL4AA6NLU0 287 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 RFPL4AL1F8VTS6 287 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 BCL2L11O43521 198 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CD37P11049 281 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ADRA2CP18825 462 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 SEMA3BQ13214 749 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 FAHD1Q6P587 224 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 OR51H1Q8NH63 302 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 OLIG1Q8TAK6 271 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 RXFP4Q8TDU9 374 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF251Q9BRH9 671 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ISG20L2Q9H9L3 353 aaKnown RBP11.32□□□□□ -0.6
CLCN4-203ENST00000421085 NUMA1Q14980 2115 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 IFITM5A6NNB3 132 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ZBTB42B2RXF5 422 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 PTAFRP25105 342 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CLEC12BQ2HXU8 276 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 ABHD17CQ6PCB6 329 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 TSLPQ969D9 159 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 SLC46A1Q96NT5 459 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 CHST11Q9NPF2 352 aa11.32□□□□□ -0.6
CLCN4-203ENST00000421085 FABP1P07148 127 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 CD1EP15812 388 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 NR0B2Q15466 257 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PLAC9Q5JTB6 97 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 AAED1Q7RTV5 226 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 OR13D1Q8NGV5 346 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PPP1R1CQ8WVI7 109 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PDXPQ96GD0 296 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 LCORQ96JN0 433 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 CXCL16Q9H2A7 254 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 OR51I2Q9H344 312 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 MAN2B1O00754 1011 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 DVL1O14640 695 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PI3P19957 117 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 DVL1P1P54792 670 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 CSNK1G2P78368 415 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 DUSP5Q16690 384 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 OR5AP2Q8NGF4 316 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 RPUSD4Q96CM3 377 aaKnown RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PLEKHF2Q9H8W4 249 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 KCNIP2Q9NS61 270 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 FLVCR1Q9Y5Y0 555 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 ARL2-SNX15V9GYD0 113 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SSSCA1O60232 199 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 POU3F3P20264 500 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PRPH2P23942 346 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SLC35A1P78382 337 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 CRLF2Q9HC73 371 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 ASB1Q9Y576 335 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 MYH9P35579 1960 aaKnown RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 HOXC13P31276 330 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 BMPR1AP36894 532 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 STT3BQ8TCJ2 826 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 POMT2Q9UKY4 750 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 BTBD17A6NE02 478 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 CSF2RBP32927 897 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF385BQ569K4 471 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 TRIM61Q5EBN2 209 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PRAMEF20Q5VT98 475 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 MARCH3Q86UD3 253 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 MISPQ8IVT2 679 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 C19orf47Q8N9M1 422 aaKnown RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PLA2G12AQ9BZM1 189 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 SPATA6Q9NWH7 488 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 PISDQ9UG56 409 aa11.31□□□□□ -0.6
CLCN4-203ENST00000421085 COL2A1P02458 1487 aaPredicted RBP11.31□□□□□ -0.6
CLCN4-203ENST00000421085 AQP7O14520 342 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 TMEM81Q6P7N7 255 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SH2D5Q6ZV89 423 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CNEP1R1Q8N9A8 125 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 LRFN5Q96NI6 719 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CLSTN3Q9BQT9 956 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 ZNF586Q9NXT0 402 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SLC35E2P0CK97 266 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 CLCF1Q9UBD9 225 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 HS3ST2Q9Y278 367 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 G3V3Q6 166 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 ENSAO43768 121 aaKnown RBP11.3□□□□□ -0.6
CLCN4-203ENST00000421085 SFTA3P0C7M3 94 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 HRH1P35367 487 aa11.3□□□□□ -0.6
CLCN4-203ENST00000421085 ENDOGQ14249 297 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms