RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 WNT5BQ9H1J7 359 aa14.23□□□□□ -0.13
UPF3AP3-201ENST00000420996 ELOVL3Q9HB03 270 aa14.23□□□□□ -0.13
UPF3AP3-201ENST00000420996 PATZ1Q9HBE1 687 aaKnown RBP14.23□□□□□ -0.13
UPF3AP3-201ENST00000420996 MSL2Q9HCI7 577 aa14.23□□□□□ -0.13
UPF3AP3-201ENST00000420996 EGFL7Q9UHF1 273 aa14.23□□□□□ -0.13
UPF3AP3-201ENST00000420996 CST2P09228 141 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 ZNF12P17014 697 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 SLC6A9P48067 706 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 ARHGDIAP52565 204 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 CRYBA2P53672 197 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 BAMBIQ13145 260 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 LAPTM4AQ15012 233 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 TMEM155Q4W5P6 130 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 MTX3Q5HYI7 312 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 KLF17Q5JT82 389 aaPredicted RBP14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 CCDC80Q76M96 950 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 KLHL36Q8N4N3 616 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 SPICQ8N5J4 248 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 ZNF283Q8N7M2 679 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 TMEM255BQ8WV15 326 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 TMEM239Q8WW34 195 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 C4orf45Q96LM5 186 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 C1orf147Q96MC9 270 aaPredicted RBP14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 ALG12Q9BV10 488 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 C1QTNF5Q9BXJ0 243 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 TXNIPQ9H3M7 391 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 UNKLQ9H9P5 680 aaKnown RBP14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 C20orf141Q9NUB4 165 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 TMEM106BQ9NUM4 274 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 DCAF16Q9NXF7 216 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 TIMM10BQ9Y5J6 103 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 INSIG2Q9Y5U4 225 aa14.22□□□□□ -0.13
UPF3AP3-201ENST00000420996 POM121CA8CG34 1229 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 ANGPT2O15123 496 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 TIMM8AO60220 97 aaPredicted RBP14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 OR5F1O95221 314 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 LAP3P28838 519 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 TAS2R41P59536 307 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 PCBD1P61457 104 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 IL13RA1P78552 427 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 PSG7Q13046 419 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 TAF11Q15544 211 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 VMACQ2NL98 169 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 ARL9Q6T311 187 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 TREML4Q6UXN2 200 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 LRRC28Q86X40 367 aaPredicted RBP14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 BCL6BQ8N143 479 aaPredicted RBP14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 OR10A6Q8NH74 314 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 FNDC8Q8TC99 324 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 SAMD8Q96LT4 415 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 ZNF48Q96MX3 618 aaPredicted RBP14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 RBP7Q96R05 134 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 MRI1Q9BV20 369 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 POLR2J2Q9GZM3 115 aaKnown RBP14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 POLR2J3Q9H1A7 115 aaKnown RBP14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 RIMS3Q9UJD0 308 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 SH3GLB1Q9Y371 365 aa14.21□□□□□ -0.13
UPF3AP3-201ENST00000420996 A8MXK9 166 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 CLDN34H7C241 214 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 RNASE1P07998 156 aaKnown RBP14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 TNFRSF1AP19438 455 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 TUBG1P23258 451 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 TNFSF4P23510 183 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 GUCA1AP43080 201 aaPredicted RBP14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 GZMMP51124 257 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 HNRNPA0Q13151 305 aaKnown RBP14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 NFYCQ13952 458 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 PDLIM3Q53GG5 364 aaPredicted RBP14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 ZNF774Q6NX45 483 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 FOXL2NBQ6ZUU3 175 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 SYT9Q86SS6 491 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 TSPEARQ8WU66 669 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 SLC25A28Q96A46 364 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 TUBG2Q9NRH3 451 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 MED31Q9Y3C7 131 aa14.2□□□□□ -0.14
UPF3AP3-201ENST00000420996 F5H0A9 414 aaPredicted RBP14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 THRBP10828 461 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 GSTM3P21266 225 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 RPL27P61353 136 aaKnown RBP14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 SEC61A1P61619 476 aaKnown RBP14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 BTG1P62324 171 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 PIN1Q13526 163 aaPredicted RBP14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 ALG10Q5BKT4 473 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 NPEPL1Q8NDH3 523 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 MS4A7Q9GZW8 240 aaPredicted RBP14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 MAN2C1Q9NTJ4 1040 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 TBCCD1Q9NVR7 557 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 BAG5Q9UL15 447 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 HIF3AQ9Y2N7 669 aa14.19□□□□□ -0.14
UPF3AP3-201ENST00000420996 HTR3EA5X5Y0 456 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 ABHD16AO95870 558 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 TNFRSF1BP20333 461 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 RBMXP38159 391 aaKnown RBP14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 DEFA6Q01524 100 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 PAX8Q06710 450 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 TOP3AQ13472 1001 aaPredicted RBP14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 ENDOGQ14249 297 aaKnown RBP14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 ZMYND11Q15326 602 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 ESCO2Q56NI9 601 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 AGBL2Q5U5Z8 902 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms