RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LYPD4Q6UWN0 246 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 VASH1Q7L8A9 365 aaPredicted RBP12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 SATL1Q86VE3 508 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 ATCAYQ86WG3 371 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 ANKRD13BQ86YJ7 626 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF679Q8IYX0 411 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 C9orf106Q8NAJ2 232 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR5M9Q8NGP3 310 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR6N2Q8NGY6 317 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 DGCR14Q96DF8 476 aaKnown RBP12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 YIPF6Q96EC8 236 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 OPALINQ96PE5 141 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 TTYH2Q9BSA4 534 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 SLC7A10Q9NS82 523 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 LUZP4Q9P127 313 aa12.56□□□□□ -0.4
SHMT1P1-201ENST00000419974 NBASA2RRP1 2371 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 FLNCQ14315 2725 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TVP23AA6NH52 213 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 METTL15A6NJ78 407 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF587BE7ETH6 402 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 OGG1O15527 345 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 PLPP2O43688 288 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 SLC19A2O60779 497 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TNFSF13O75888 250 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 CGAP01215 116 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TPOP07202 933 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 CST2P09228 141 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 CD8BP10966 210 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 ABOP16442 354 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 MPGP29372 298 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TMBIM6P55061 237 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 DBPQ10586 325 aaPredicted RBP12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 AQP6Q13520 282 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 MED22Q15528 200 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 ARMCX4Q5H9R4 360 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR2G6Q5TZ20 316 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 GFRALQ6UXV0 394 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TFAP2EQ6VUC0 442 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 RPTNQ6XPR3 784 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 SSX6Q7RTT6 188 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 CD163Q86VB7 1156 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 DOLPP1Q86YN1 238 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 SNX33Q8WV41 574 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 RNF133Q8WVZ7 376 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 NSMAFQ92636 917 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TMIGD2Q96BF3 282 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF775Q96BV0 537 aaPredicted RBP12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR8B4Q96RC9 309 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 FOXB1Q99853 325 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 SFXN3Q9BWM7 321 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 C1orf198Q9H425 327 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 RERGLQ9H628 205 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
SHMT1P1-201ENST00000419974 ALPK2Q86TB3 2170 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 CCRL2O00421 344 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 MPZL1O95297 269 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 PSMB9P28065 219 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 LIPAP38571 399 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 ENDOGQ14249 297 aaKnown RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 CD200R1LQ6Q8B3 271 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 GDPGP1Q6ZNW5 385 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 Q6ZT83 130 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 PHC2Q8IXK0 858 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 CCDC36Q8IYA8 594 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 ZNF100Q8IYN0 542 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 GJC3Q8NFK1 279 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 SPRYD4Q8WW59 207 aaPredicted RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 GATAD2BQ8WXI9 593 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 COQ7Q99807 217 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 RBM24Q9BX46 236 aaKnown RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 NIPAL2Q9H841 368 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 DDX28Q9NUL7 540 aaKnown RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 NDUFB11Q9NX14 153 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 MRM2Q9UI43 246 aaKnown RBP12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 LHFPL6Q9Y693 200 aa12.54□□□□□ -0.4
SHMT1P1-201ENST00000419974 TTLL8A6PVC2 850 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 TOXO94900 526 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 GABARAPO95166 117 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 GPANK1O95872 356 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 IL2RAP01589 272 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 OR8G3PP0DMU2 310 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 PSKH1P11801 424 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 COX5AP20674 150 aa12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 PSMA1P25786 263 aaKnown RBP12.53□□□□□ -0.4
SHMT1P1-201ENST00000419974 TGFBR2P37173 567 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms