RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZPLD1Q8TCW7 415 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 AQP10Q96PS8 301 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SSX3Q99909 188 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SYT4Q9H2B2 425 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 RXFP3Q9NSD7 469 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ABT1Q9ULW3 272 aaKnown RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 MRPS33Q9Y291 106 aaKnown RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TMED7Q9Y3B3 224 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3DA0A087WVF3 549 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3IA0A087WXS9 549 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 C13orf42A0A1B0GVH6 325 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1W2PPC1 479 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 OR52A4PA6NMU1 304 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3LB9A6J9 549 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 GLCEO94923 617 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SERPINA5P05154 406 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 LYL1P12980 280 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 MPZP25189 248 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SULT1A1P50225 295 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SULT1A2P50226 295 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ADAM8P78325 824 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 LBHQ53QV2 105 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 DNLZQ5SXM8 178 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3CQ6IPX1 549 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 PAPD4Q6PIY7 484 aaKnown RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TMPPEQ6ZT21 453 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ANKRD33Q7Z3H0 272 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3Q8IZP1 549 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 GPR148Q8TDV2 347 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CASTOR1Q8WTX7 329 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ARSGQ96EG1 525 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF514Q96K75 400 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 MACROD1Q9BQ69 325 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 RGCCQ9H4X1 137 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 OR2S2Q9NQN1 319 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC23A2Q9UGH3 650 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 KLHDC2Q9Y2U9 406 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TMEM184BQ9Y519 407 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ENTPD2Q9Y5L3 495 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 IGKV1-8A0A0C4DH67 115 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1B0GTH9 108 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 K7ESM1 405 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 PEX12O00623 359 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CSN2P05814 226 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 VAMP1P23763 118 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 DDTP30046 118 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 GATMP50440 423 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 EIF5AP63241 154 aaKnown RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 OR5K2Q8NHB8 316 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 LYPD6BQ8NI32 183 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 S100PBPQ96BU1 408 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 DTD2Q96FN9 168 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC41A2Q96JW4 573 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 LURAP1Q96LR2 239 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 NEU1Q99519 415 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 C2orf88Q9BSF0 95 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 COMMD4Q9H0A8 199 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 KLK13Q9UKR3 277 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SPEGQ15772 3267 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 TMEM212A6NML5 194 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 M0R036 132 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 OR10H2O60403 315 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 MOSPD3O75425 235 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SFTPCP11686 197 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CKBP12277 381 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 PLAURQ03405 335 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CHAF1BQ13112 559 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 KIAA0141Q14154 515 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 RHEBQ15382 184 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ASTLQ6HA08 431 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF627Q7L945 461 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF676Q8N7Q3 588 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 PCSK9Q8NBP7 692 aaKnown RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SUSD6Q92537 303 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 GAS2L1Q99501 681 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 PIGQQ9BRB3 760 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ALG12Q9BV10 488 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC5A7Q9GZV3 580 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 FLRT3Q9NZU0 649 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CXXC1Q9P0U4 656 aaPredicted RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CXorf65A6NEN9 183 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 EFSO43281 561 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 PLGP00747 810 aaPredicted RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ARG1P05089 322 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ERCC1P07992 297 aaPredicted RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 FBXO45P0C2W1 286 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 OR8U9P0C7N5 309 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 ARRB1P49407 418 aaPredicted RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 RAB4BP61018 213 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 TCTN1Q2MV58 587 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 RNASE10Q5GAN6 216 aaKnown RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 PRSS54Q6PEW0 395 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC16A9Q7RTY1 509 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 CD163Q86VB7 1156 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 PPP1R3BQ86XI6 285 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 FRMD1Q8N878 549 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 PNLDC1Q8NA58 520 aaKnown RBP7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 OR1J1Q8NGS3 322 aa7.24□□□□□ -1.25
HMGXB4-202ENST00000418170 OR8U1Q8NH10 309 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms