RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 LRRC75AQ8NAA5 344 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 FNDC8Q8TC99 324 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 C10orf82Q8WW14 230 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 GEMIN6Q8WXD5 167 aaKnown RBP12.54□□□□□ -0.4
RPS28-201ENST00000417088 BPIFA2Q96DR5 249 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 ZMYND19Q96E35 227 aaPredicted RBP12.54□□□□□ -0.4
RPS28-201ENST00000417088 SIKE1Q9BRV8 207 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 DCAF16Q9NXF7 216 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 UBAP1Q9NZ09 502 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 ZDHHC8Q9ULC8 765 aa12.54□□□□□ -0.4
RPS28-201ENST00000417088 ISPDA4D126 451 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 HTR3EA5X5Y0 456 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 H3BSA7 217 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 IGHMP01871 453 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 IFI30P13284 250 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 FUT4P22083 530 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 ZFP36P26651 326 aaKnown RBP12.53□□□□□ -0.4
RPS28-201ENST00000417088 KDELR2P33947 212 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 CTXN1P60606 82 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
RPS28-201ENST00000417088 C22orf15Q8WYQ4 148 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
RPS28-201ENST00000417088 C4orf45Q96LM5 186 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 DIRC2Q96SL1 478 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 TMEM120AQ9BXJ8 343 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 CGGBP1Q9UFW8 167 aaPredicted RBP12.53□□□□□ -0.4
RPS28-201ENST00000417088 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
RPS28-201ENST00000417088 PPIAL4EA0A075B759 164 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 PPIAL4CA0A0B4J2A2 164 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 A0A1W2PPL8 197 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 PPIAL4DF5H284 164 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 MRASO14807 208 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 WIPF1O43516 503 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 PRSS23O95084 383 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 NPPAP01160 153 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 SCG5P05408 212 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 PPIAL4FP0DN26 164 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 MSR1P21757 451 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 FPR2P25090 351 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 RBMXP38159 391 aaKnown RBP12.52□□□□□ -0.41
RPS28-201ENST00000417088 GUCA1AP43080 201 aaPredicted RBP12.52□□□□□ -0.41
RPS28-201ENST00000417088 ARHGDIAP52565 204 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 PCBD1P61457 104 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.41
RPS28-201ENST00000417088 TNFAIP6P98066 277 aaPredicted RBP12.52□□□□□ -0.41
RPS28-201ENST00000417088 PSG7Q13046 419 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 CDK5R2Q13319 367 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 FHL1Q13642 323 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.41
RPS28-201ENST00000417088 MTX3Q5HYI7 312 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 COQ5Q5HYK3 327 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 FAM205BPQ63HN1 556 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 MICU2Q8IYU8 434 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 OR51A7Q8NH64 312 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 TPD52L3Q96J77 140 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 NPTNQ9Y639 398 aa12.52□□□□□ -0.41
RPS28-201ENST00000417088 TRAV27A0A087WT01 109 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 A6NIZ1 184 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 C12orf71A8MTZ7 269 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 TIMM8AO60220 97 aaPredicted RBP12.51□□□□□ -0.41
RPS28-201ENST00000417088 FOXH1O75593 365 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 IGHV2-70P01814 119 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 SBK2P0C263 348 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 YAP1P46937 504 aaKnown RBP12.51□□□□□ -0.41
RPS28-201ENST00000417088 RAP1BP61224 184 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 RAP1AP62834 184 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 SELENOWP63302 87 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 KLF10Q13118 480 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 AWAT1Q58HT5 328 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 ZMAT1Q5H9K5 638 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 SYT9Q86SS6 491 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 TREML1Q86YW5 311 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 NRMQ8IXM6 262 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
RPS28-201ENST00000417088 POFUT1Q9H488 388 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 POLE4Q9NR33 117 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 TMEM106BQ9NUM4 274 aa12.51□□□□□ -0.41
RPS28-201ENST00000417088 TANC2Q9HCD6 1990 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 ABHD16AO95870 558 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 COX5BP10606 129 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 IFNA8P32881 189 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 PRKCDQ05655 676 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 ARL9Q6T311 187 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 Q6ZR03 302 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 ZER1Q7Z7L7 766 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 OAFQ86UD1 273 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 ZNF283Q8N7M2 679 aa12.5□□□□□ -0.41
RPS28-201ENST00000417088 DEFB108BQ8NET1 73 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms