RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 FCGR1AP12314 374 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 CCL2P13500 99 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 NCK1P16333 377 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 ZNF12P17014 697 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 CBLP22681 906 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 HTR2AP28223 471 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 SRSF4Q08170 494 aaKnown RBP8.08□□□□□ -1.12
RFFL-203ENST00000413582 ZNF154Q13106 437 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 TSTQ16762 297 aaKnown RBP8.08□□□□□ -1.12
RFFL-203ENST00000413582 MS4A18Q3C1V0 323 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 FAM98BQ52LJ0 330 aaKnown RBP8.08□□□□□ -1.12
RFFL-203ENST00000413582 TMEM255AQ5JRV8 349 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 ARMC8Q8IUR7 673 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 ADGRG5Q8IZF4 528 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 OR6N1Q8NGY5 312 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 SLC35B4Q969S0 331 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 TMIGD2Q96BF3 282 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 TXNDC15Q96J42 360 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 C12orf10Q9HB07 376 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 S100A14Q9HCY8 104 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 UBAP1Q9NZ09 502 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 STX18Q9P2W9 335 aaKnown RBP8.08□□□□□ -1.12
RFFL-203ENST00000413582 BAG5Q9UL15 447 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
RFFL-203ENST00000413582 AP4S1Q9Y587 144 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 AUP1Q9Y679 476 aa8.08□□□□□ -1.12
RFFL-203ENST00000413582 DOCK11Q5JSL3 2073 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 A0A1B0GWA3 101 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 TRAPPC2LH3BP13 241 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 IGHV1-46P01743 117 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 IGHV3-13P01766 116 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 IGHMP01871 453 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 BGLAPP02818 100 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 LCKP06239 509 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 RAP2AP10114 183 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 OMGP23515 440 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 AQP1P29972 269 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 CSNK1A1P48729 337 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 ZNF81P51508 661 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 CRYBA2P53672 197 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 PUDPQ08623 228 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 HNRNPA0Q13151 305 aaKnown RBP8.07□□□□□ -1.12
RFFL-203ENST00000413582 PMS2P3Q13401 168 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 LRRC23Q53EV4 343 aaPredicted RBP8.07□□□□□ -1.12
RFFL-203ENST00000413582 CYBRD1Q53TN4 286 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 FAM209AQ5JX71 171 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 DHRS4L2Q6PKH6 230 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 WDR88Q6ZMY6 472 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 SPATC1Q76KD6 591 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 PIWIL3Q7Z3Z3 882 aaKnown RBP8.07□□□□□ -1.12
RFFL-203ENST00000413582 COMTD1Q86VU5 262 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 SLC22A24Q8N4F4 322 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 SCAIQ8N9R8 606 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 OR6S1Q8NH40 331 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 ST7LQ8TDW4 575 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 CANT1Q8WVQ1 401 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 C11orf40Q8WZ69 217 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 CCL17Q92583 94 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 MOGAT1Q96PD6 335 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 BCL2L14Q9BZR8 327 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 MMP27Q9H306 513 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 ARMC7Q9H6L4 198 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 RNPEPL1Q9HAU8 725 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 CACYBPQ9HB71 228 aaKnown RBP8.07□□□□□ -1.12
RFFL-203ENST00000413582 CDH20Q9HBT6 801 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 RPS6KB2Q9UBS0 482 aa8.07□□□□□ -1.12
RFFL-203ENST00000413582 ZSCAN5BA6NJL1 495 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 A8MXK9 166 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 TPST1O60507 370 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 ATP6V1G2O95670 118 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 KNG1P01042 644 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 IGHV2-70P01814 119 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 MT-ND5P03915 603 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 OPN1SWP03999 348 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 SEMG1P04279 462 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 PRKAR1BP31321 381 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 MAGEA2P43356 314 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 MMP15P51511 669 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 UCP2P55851 309 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 SEC61A1P61619 476 aaKnown RBP8.06□□□□□ -1.12
RFFL-203ENST00000413582 SLC3A1Q07837 685 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 GK3PQ14409 553 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 ALG10BQ5I7T1 473 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 C16orf87Q6PH81 154 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 C9orf139Q6ZV77 190 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 RHOUQ7L0Q8 258 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 LSMEM1Q8N8F7 131 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 ICA1LQ8NDH6 482 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 TMEM54Q969K7 222 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 TAMM41Q96BW9 452 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 SH3GL3Q99963 347 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 CITED1Q99966 193 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 ASPNQ9BXN1 380 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 C1orf198Q9H425 327 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 IL1RAPQ9NPH3 570 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 TMEM38BQ9NVV0 291 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 DCAF16Q9NXF7 216 aa8.06□□□□□ -1.12
RFFL-203ENST00000413582 MRPL39Q9NYK5 338 aaKnown RBP8.06□□□□□ -1.12
RFFL-203ENST00000413582 INSIG2Q9Y5U4 225 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms