RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 IGLV3-9A0A075B6K5 115 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 C5orf49A4QMS7 147 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 A8MV72 311 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-211ENST00000413354 KHDRBS3O75525 346 aaKnown RBP13.47□□□□□ -0.25
MCF2L-211ENST00000413354 MT-ND5P03915 603 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 IGFBP1P08833 259 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-211ENST00000413354 GIFP27352 417 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 ENDOGQ14249 297 aaKnown RBP13.47□□□□□ -0.25
MCF2L-211ENST00000413354 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 CYB5R2Q6BCY4 276 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 ARL9Q6T311 187 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 THSD4Q6ZMP0 1018 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 LRP11Q86VZ4 500 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 ZCCHC24Q8N2G6 241 aaKnown RBP13.47□□□□□ -0.25
MCF2L-211ENST00000413354 LINC00471Q8N535 108 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 ICA1LQ8NDH6 482 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 OR1J1Q8NGS3 322 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 FOXN4Q96NZ1 517 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 BPESC1Q9GZL8 116 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 WNT5BQ9H1J7 359 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 SYT4Q9H2B2 425 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 MAGIXQ9H6Y5 334 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 TAAR3PQ9P1P4 343 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 MYEF2Q9P2K5 600 aaKnown RBP13.47□□□□□ -0.25
MCF2L-211ENST00000413354 IER3IP1Q9Y5U9 82 aa13.47□□□□□ -0.25
MCF2L-211ENST00000413354 H3BSA7 217 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 SOCS2O14508 198 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 IMPA2O14732 288 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 CRLF1O75462 422 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 COX5BP10606 129 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 CTLA4P16410 223 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 ATP6V1B2P21281 511 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 FXYD6P3P58550 94 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 AQP6Q13520 282 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 MAD2L1BPQ15013 274 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-211ENST00000413354 ZNF718Q3SXZ3 478 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 TMEM154Q6P9G4 183 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 PGM2L1Q6PCE3 622 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 JAZF1Q86VZ6 243 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 DHFR2Q86XF0 187 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 GLB1L2Q8IW92 636 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 GNPDA2Q8TDQ7 276 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 SNX18Q96RF0 628 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 OR52D1Q9H346 318 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 IL20RAQ9UHF4 553 aa13.46□□□□□ -0.25
MCF2L-211ENST00000413354 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ARPC3O15145 178 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 DOK2O60496 412 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 SLC16A7O60669 478 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ICMTO60725 284 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 PPP1R3DO95685 299 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ZNF23P17027 643 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 CRABP1P29762 137 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 GCH1P30793 250 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 MAGEA2P43356 314 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 GSSP48637 474 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ARHGDIAP52565 204 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 CHN2P52757 468 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ERVS71-1P61550 626 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 LSM6P62312 80 aaKnown RBP13.45□□□□□ -0.26
MCF2L-211ENST00000413354 MRPS11P82912 194 aaKnown RBP13.45□□□□□ -0.26
MCF2L-211ENST00000413354 TSPAN31Q12999 210 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 TRIM25Q14258 630 aaKnown RBP13.45□□□□□ -0.26
MCF2L-211ENST00000413354 RFX4Q33E94 735 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 PCGF3Q3KNV8 242 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 RPL13AP3Q6NVV1 102 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ZNF774Q6NX45 483 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 C1orf94Q6P1W5 598 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-211ENST00000413354 GPA33Q99795 319 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 C1orf21Q9H246 121 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 RERGLQ9H628 205 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 CHODLQ9H9P2 273 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 EMC7Q9NPA0 242 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 HINT3Q9NQE9 182 aaKnown RBP13.45□□□□□ -0.26
MCF2L-211ENST00000413354 POLR1DQ9Y2S0 133 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 LYVE1Q9Y5Y7 322 aa13.45□□□□□ -0.26
MCF2L-211ENST00000413354 LOC100509620A0A075B734 347 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 C17orf100A8MU93 164 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 TNFRSF11BO00300 401 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 SGCEO43556 437 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 IDH3BO43837 385 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 CLPTM1O96005 669 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 RENP00797 406 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 IGHV3-13P01766 116 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 NAT2P11245 290 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 ZNF16P17020 682 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-211ENST00000413354 ACHEP22303 614 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 NOS3P29474 1203 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 WNT5AP41221 380 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 HTR5AP47898 357 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 RIN1Q13671 783 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 FAM98BQ52LJ0 330 aaKnown RBP13.44□□□□□ -0.26
MCF2L-211ENST00000413354 PGBD2Q6P3X8 592 aa13.44□□□□□ -0.26
MCF2L-211ENST00000413354 ZNF620Q6ZNG0 422 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms