RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ALPK3Q96L96 1907 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 A0A0G2JMP0 313 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 H3BUI4 141 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 ITGA5P08648 1049 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 POLR2IP36954 125 aaKnown RBP7.71□□□□□ -1.17
SYNE1-211ENST00000413186 OPRL1P41146 370 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 HMGA2P52926 109 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 RPL18Q07020 188 aaKnown RBP7.71□□□□□ -1.17
SYNE1-211ENST00000413186 STK11Q15831 433 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 ODF4Q2M2E3 257 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 C16orf47Q6ZP98 133 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF101Q8IZC7 436 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 SLC37A3Q8NCC5 494 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 OR4M2Q8NGB6 313 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 ADAMTS14Q8WXS8 1223 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 HOXB13Q92826 284 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-211ENST00000413186 CTHRC1Q96CG8 243 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 RADILQ96JH8 1075 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 GNRHR2Q96P88 292 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 CITED1Q99966 193 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 CDCA4Q9BXL8 241 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 OR10A2Q9H208 303 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 GPR160Q9UJ42 338 aa7.71□□□□□ -1.17
SYNE1-211ENST00000413186 GGT3PA6NGU5 568 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 IMPA2O14732 288 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 GLCEO94923 617 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 GYPBP06028 91 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 GUSBP08236 651 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ERP29P30040 261 aaKnown RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ADH7P40394 386 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 SOX2P48431 317 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 TMPRSS3P57727 454 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 CDC20Q12834 499 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 BCL2A1Q16548 175 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 WIPI1Q5MNZ9 446 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 FAM198BQ6UWH4 519 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 SSX7Q7RTT5 188 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 MRPL41Q8IXM3 137 aaKnown RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF687Q8N1G0 1237 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 DRAXINQ8NBI3 349 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 OR51D1Q8NGF3 324 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 OR5AK2Q8NH90 309 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 BABAM2Q9NXR7 383 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 EXTL2Q9UBQ6 330 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 IGLV3-12A0A075B6K2 115 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 KDM4EB2RXH2 506 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF814B7Z6K7 855 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 TIAF1O95411 115 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 RAC2P15153 192 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 GABRA5P31644 462 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 MAP2K3P46734 347 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ID4P47928 161 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 MRPS10P82664 201 aaKnown RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 MFAP5Q13361 173 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ACKR1Q16570 336 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 NTRK2Q16620 822 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 NPSR1Q6W5P4 371 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF813Q6ZN06 617 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 FCRLAQ7L513 359 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF321PQ8N8H1 164 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-211ENST00000413186 HCAR1Q9BXC0 346 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ENAMQ9NRM1 1142 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 ACOXLQ9NUZ1 547 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 SEMA5BQ9P283 1151 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 DENND4CQ5VZ89 1909 aa7.71□□□□□ -1.18
SYNE1-211ENST00000413186 SLC22A20A6NK97 555 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ZAR1LA6NP61 321 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TERTO14746 1132 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 WNT11O96014 354 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 CTSBP07858 339 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 RFC3P40938 356 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 RPL23AP62750 156 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MAB21L1Q13394 359 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 THEM4Q5T1C6 240 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MDGA2Q7Z553 956 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 LSMEM1Q8N8F7 131 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 OR52N1Q8NH53 320 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 GPR148Q8TDV2 347 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 GPR119Q8TDV5 335 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 EIF5A2Q9GZV4 153 aaKnown RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 WDR76Q9H967 626 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 NTN4Q9HB63 628 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 COPS3Q9UNS2 423 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 POLEQ07864 2286 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 C21orf33P30042 268 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF74Q16587 644 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 GFRALQ6UXV0 394 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 Q6ZPB1 254 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 SPRYD4Q8WW59 207 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 ZNF582Q96NG8 517 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 PHOX2BQ99453 314 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 COL25A1Q9BXS0 654 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TAS2R8Q9NYW2 309 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TAS2R3Q9NYW6 316 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 MALT1Q9UDY8 824 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 UBQLN2Q9UHD9 624 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 A0A0U1RQK1 487 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 TMEM129A0AVI4 362 aa7.7□□□□□ -1.18
SYNE1-211ENST00000413186 METTL15A6NJ78 407 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms