RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SLC6A9P48067 706 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ARHGDIAP52565 204 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SEC61A1P61619 476 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IL13RA1P78552 427 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TAF11Q15544 211 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MTX3Q5HYI7 312 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SLC25A47Q6Q0C1 308 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SLC30A8Q8IWU4 369 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TMEM255BQ8WV15 326 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SLC25A28Q96A46 364 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 C4orf45Q96LM5 186 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CGREF1Q99674 301 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MRI1Q9BV20 369 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MS4A7Q9GZW8 240 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ELOVL3Q9HB03 270 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TMBIM4Q9HC24 238 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 C20orf141Q9NUB4 165 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TMEM106BQ9NUM4 274 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NDUFAF1Q9Y375 327 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TIMM10BQ9Y5J6 103 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 POM121CA8CG34 1229 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 H3BSA7 217 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ICMTO60725 284 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CST2P09228 141 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NR2C1P13056 603 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PCGF2P35227 344 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RBM34P42696 430 aaKnown RBP12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TAS2R41P59536 307 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PSG7Q13046 419 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CDK5R2Q13319 367 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TMEM155Q4W5P6 130 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 INTS11Q5TA45 600 aaKnown RBP12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZNF774Q6NX45 483 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZER1Q7Z7L7 766 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LRRC28Q86X40 367 aaPredicted RBP12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 DPP10Q8N608 796 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RASSF5Q8WWW0 418 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TAF15Q92804 592 aaKnown RBP eCLIP12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SAMD8Q96LT4 415 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RBP7Q96R05 134 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TXNIPQ9H3M7 391 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RABEP2Q9H5N1 569 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 KAT8Q9H7Z6 458 aaKnown RBP12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SH3GLB1Q9Y371 365 aa12□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TRRAPQ9Y4A5 3859 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IGHV3OR16-10A0A075B7F0 116 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 GMNCA6NCL1 334 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ANGPT2O15123 496 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TSPAN19P0C672 248 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TNFRSF1AP19438 455 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TNFRSF1BP20333 461 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TNFSF4P23510 183 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 GUCA1AP43080 201 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PCBD1P61457 104 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 BTG1P62324 171 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TOP3AQ13472 1001 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZMYND11Q15326 602 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SLC9A3R2Q15599 337 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ESCO2Q56NI9 601 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ARL9Q6T311 187 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZNF283Q8N7M2 679 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CLDN22Q8N7P3 220 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR2Z1Q8NG97 314 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR52E2Q8NGJ4 325 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR10A6Q8NH74 314 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LRRC8CQ8TDW0 803 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TMEM239Q8WW34 195 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LIPHQ8WWY8 451 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RIMS3Q9UJD0 308 aa11.99□□□□□ -0.49
HLA-DQB2-229ENST00000411527 A0A1W2PPL8 197 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NPIPB13A6NJU9 1138 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 A8MXK9 166 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NPIPB4C9JG80 1138 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CLDN34H7C241 214 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SHOX2O60902 331 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 GPANK1O95872 356 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IGF2P01344 180 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 GSTM3P21266 225 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CD80P33681 288 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CRYBA2P53672 197 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PAX8Q06710 450 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PIN1Q13526 163 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NFYCQ13952 458 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 VMACQ2NL98 169 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MIDNQ504T8 468 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ALG10Q5BKT4 473 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LEG1Q6P5S2 330 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CCDC80Q76M96 950 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 JAZF1Q86VZ6 243 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ITLN1Q8WWA0 313 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ALG12Q9BV10 488 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SLITRK2Q9H156 845 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 POFUT1Q9H488 388 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MAN2C1Q9NTJ4 1040 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR5V1Q9UGF6 321 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PPP1R3CQ9UQK1 317 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MED31Q9Y3C7 131 aa11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SOX21Q9Y651 276 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB2-229ENST00000411527 F5H0A9 414 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms