RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 LRRC18Q8N456 261 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 LSMEM1Q8N8F7 131 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ATG16L2Q8NAA4 619 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NPEPL1Q8NDH3 523 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 WFDC9Q8NEX5 89 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR4C13Q8NGP0 309 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR5J2Q8NH18 312 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR5R1Q8NH85 324 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR2T6Q8NHC8 308 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 AGR3Q8TD06 166 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NPRL2Q8WTW4 380 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC38A5Q8WUX1 472 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 C10orf82Q8WW14 230 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ITLN1Q8WWA0 313 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 IFT81Q8WYA0 676 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 LHX4Q969G2 390 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TESCQ96BS2 214 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HAVCR1Q96D42 359 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ITPKCQ96DU7 683 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 C4orf45Q96LM5 186 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 COG8Q96MW5 612 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CCDC115Q96NT0 180 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 WDFY2Q96P53 400 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 MOGAT1Q96PD6 335 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZIM3Q96PE6 472 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TECTBQ96PL2 329 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 OR2V2Q96R30 315 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TBX15Q96SF7 602 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF607Q96SK3 696 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 B9D2Q9BPU9 175 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM246Q9BRR3 403 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CDADC1Q9BWV3 514 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NUF2Q9BZD4 464 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 PPA2Q9H2U2 334 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TOR3AQ9H497 397 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SIAEQ9HAT2 523 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ELOVL3Q9HB03 270 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM27Q9HBJ8 222 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 GCM1Q9NP62 436 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TUBG2Q9NRH3 451 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TBCCD1Q9NVR7 557 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 THUMPD1Q9NXG2 353 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ASIC5Q9NY37 505 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 MRPL39Q9NYK5 338 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SELENONQ9NZV5 590 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 KLHL14Q9P2G3 628 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 PSMC3IPQ9P2W1 217 aaPredicted RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ERVK-18Q9QC07 812 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 BTNL2Q9UIR0 455 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NDRG4Q9ULP0 352 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF443Q9Y2A4 671 aaPredicted RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SACSQ9NZJ4 4579 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 LOC100509620A0A075B734 347 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 IGHV3-64DA0A0J9YX35 117 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1B0GVI7 797 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 WI2-2373I1.2A0A1W2PRP0 233 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 GMNCA6NCL1 334 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 CENPBD1B2RD01 187 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 MCIDASD6RGH6 385 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 LRRN3E7EW58 273 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 E9PBE3 544 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 FBP2O00757 339 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 RFXANKO14593 260 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 RIPK2O43353 540 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 NDUFA2O43678 99 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 FMO6PO60774 539 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 FBXO24O75426 580 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 ANP32DO95626 131 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 ECDO95905 644 aaPredicted RBP1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 CYB5R3P00387 301 aaPredicted RBP1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 PAHP00439 452 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 C1QCP02747 245 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 HIST1H2ABP04908 130 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 F13BP05160 661 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 VIMP08670 466 aaKnown RBP1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 PGA4P0DJD7 388 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 PGA3P0DJD8 388 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 VSIG10L2P0DP72 767 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 UMPSP11172 480 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 NR2C1P13056 603 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 ETFAP13804 333 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 MMP9P14780 707 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 ETS2P15036 469 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 RAC2P15153 192 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 IGLL1P15814 213 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 FAHP16930 419 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 LBPP18428 481 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 KRT4P19013 534 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 KITLGP21583 273 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC6A2P23975 617 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 HTR2AP28223 471 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 ALDH3A1P30838 453 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 PRKAR1BP31321 381 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 CASQ1P31415 396 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 CDAP32320 146 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 MSX2P35548 267 aaPredicted RBP1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 SERPINB5P36952 375 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 CDKN2CP42773 168 aa1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 GUCA1AP43080 201 aaPredicted RBP1.95□□□□□ -2.1
RNU4-53P-201ENST00000410828 ETV4P43268 484 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms