RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 C15orf39Q6ZRI6 1047 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 OR2AK2Q8NG84 335 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 OR13J1Q8NGT2 312 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 SELENOFO60613 162 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 SDC1P18827 310 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 HLCSP50747 726 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 SORDQ00796 357 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 CDK5R2Q13319 367 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 ZNF750Q32MQ0 723 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 DEFB124Q8NES8 71 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 DBX1A6NMT0 343 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 CDX4O14627 284 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 UBBP0CG47 229 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 CA5AP35218 305 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 RPS27AP62979 156 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 UBA52P62987 128 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 TRA2BP62995 288 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 TATDN3Q17R31 274 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 CORO6Q6QEF8 472 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 PIANPQ8IYJ0 282 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 ZIC5Q96T25 663 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 NTF3P20783 257 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 PGGHGQ32M88 737 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.764e-7■■■□□ 15.9
PRPF40A-202ENST00000410080 OR51E2Q9H255 320 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 C1GALT1Q9NS00 363 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 NAP1L6A6NFF2 107 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 MAGEB4O15481 346 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 HBE1P02100 147 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 HPNP05981 417 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 NPY1RP25929 384 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 CD27P26842 260 aa10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 SMAP2Q8WU79 429 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 PCDHGA9Q9Y5G4 932 aaKnown RBP10.31□□□□□ -0.76
PRPF40A-202ENST00000410080 LRIT2A6NDA9 550 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SLC22A20A6NK97 555 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 G3V2L1 256 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 H0Y8X5 98 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 COX7A2P2O60397 106 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 CSO75390 466 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 LAP3P28838 519 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 MEOX1P50221 254 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ZNF385BQ569K4 471 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 GLYATL3Q5SZD4 288 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 CST9Q5W186 159 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 RANBP10Q6VN20 620 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 APH1BQ8WW43 257 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SLC22A11Q9NSA0 550 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SEMA4GQ9NTN9 838 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 OR52A1Q9UKL2 312 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ARAP2Q8WZ64 1704 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 C9orf172C9J069 976 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 CYTIPO60759 359 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 NPY4RP50391 375 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ZNF83P51522 516 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ACKR1Q16570 336 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SPANXN5Q5MJ07 72 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 Q6ZPB1 254 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ANKRD13BQ86YJ7 626 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 CRISPLD2Q9H0B8 497 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SNAPINO95295 136 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 PRDX1Q06830 199 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 RTL10Q7L3V2 364 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 OR51F2Q8NH61 342 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SLC37A2Q8TED4 501 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 DOCK10Q96BY6 2186 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 AOAHP28039 575 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ACSM1Q08AH1 577 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 LEXMQ3ZCV2 418 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 RGS7BPQ6MZT1 257 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SLC22A24Q8N4F4 322 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 LRFN3Q9BTN0 628 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ZCCHC4Q9H5U6 513 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 CTSFQ9UBX1 484 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 TBXA2RP21731 343 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 H3F3AP84243 136 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 SMAD4Q13485 552 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 DOC2BQ14184 412 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 C4orf17Q53FE4 359 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 BCO1Q9HAY6 547 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 EIF3FO00303 357 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 HOXC13P31276 330 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ZNF816Q0VGE8 651 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 RPS19BP1Q86WX3 136 aaKnown RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 OR10K1Q8NGX5 313 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 PHF7Q9BWX1 381 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 WDR37Q9Y2I8 494 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 CYR61O00622 381 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 ADPRHP54922 357 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 RAB40BQ12829 278 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 LRRC28Q86X40 367 aaPredicted RBP10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 TNFRSF13CQ96RJ3 184 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 TREM2Q9NZC2 230 aa10.3□□□□□ -0.76
PRPF40A-202ENST00000410080 DNPH1O43598 174 aa10.29□□□□□ -0.76
PRPF40A-202ENST00000410080 QDPRP09417 244 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms