RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 LIMS3P0CW19 117 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 LIMS4P0CW20 117 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 PIPP12273 146 aaPredicted RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 MYL12AP19105 171 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 MSR1P21757 451 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 DCKP27707 260 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 ZNF133P52736 654 aaPredicted RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 EMX1Q04741 257 aaPredicted RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 ZNF773Q6PK81 442 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 CXorf67Q86X51 503 aaPredicted RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 ERVK13-1Q9NX77 482 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 DIMT1Q9UNQ2 313 aaKnown RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 SNX5Q9Y5X3 404 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 CIB4A0PJX0 185 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 OR6C65A6NJZ3 312 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 HSPB2A8KAH6 182 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 HLA-HP01893 362 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 LCKP06239 509 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 MPGP29372 298 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 OPRM1P35372 400 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 GABARAPL2P60520 117 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 ZNF85Q03923 595 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 POU4F2Q12837 409 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 CDSNQ15517 529 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 HSPB2Q16082 182 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 CFAP77Q6ZQR2 320 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 PRSS48Q7RTY5 328 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 GABRG1Q8N1C3 465 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 RELL2Q8NC24 303 aaPredicted RBP11.04□□□□□ -0.64
PMS1-204ENST00000409823 OTOSQ8NHW6 89 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 GATAD2BQ8WXI9 593 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 CCDC120Q96HB5 630 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 ZFP3Q96NJ6 502 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 SIAEQ9HAT2 523 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 CYB5R1Q9UHQ9 305 aa11.04□□□□□ -0.64
PMS1-204ENST00000409823 NCOA6Q14686 2063 aaPredicted RBP11.03□□□□□ -0.64
PMS1-204ENST00000409823 PNMA8CA0A1B0GUJ8 204 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 TRIM64A6NGJ6 449 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 CRHP06850 196 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 MRPS34P82930 218 aaKnown RBP11.03□□□□□ -0.64
PMS1-204ENST00000409823 FAM27E3Q08E93 113 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 ENDOGQ14249 297 aaKnown RBP11.03□□□□□ -0.64
PMS1-204ENST00000409823 MED22Q15528 200 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 STK11Q15831 433 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 TP53I3Q53FA7 332 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 KCTD8Q6ZWB6 473 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 SLC16A14Q7RTX9 510 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 CDC20BQ86Y33 519 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 MAP6Q96JE9 813 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 OR5M11Q96RB7 305 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 SIGLEC11Q96RL6 698 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 ZNF649Q9BS31 505 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 ALG8Q9BVK2 526 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 FGF20Q9NP95 211 aaPredicted RBP11.03□□□□□ -0.64
PMS1-204ENST00000409823 CENPMQ9NSP4 180 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 ZNF629Q9UEG4 869 aaPredicted RBP11.03□□□□□ -0.64
PMS1-204ENST00000409823 RPL36A-HNRNPH2H7BZ11 118 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 IGHA1P01876 353 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 OR2T7P0C7T2 308 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 HSMCR30P0CW71 290 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 OR8G3PP0DMU2 310 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 BLVRAP53004 296 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 OR12D2P58182 307 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 ADORA2A-AS1P86434 159 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 TMED1Q13445 227 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 OR2T27Q8NH04 317 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 SNX33Q8WV41 574 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 ABHD6Q9BV23 337 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 C1QTNF6Q9BXI9 259 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 MARCH7Q9H992 704 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 CCNB1IP1Q9NPC3 277 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 SLC5A6Q9Y289 635 aa11.03□□□□□ -0.64
PMS1-204ENST00000409823 UBR5O95071 2799 aaPredicted RBP11.03□□□□□ -0.64
PMS1-204ENST00000409823 FAM90A27PA6NNH2 459 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 J3QLW9 94 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 DVL2O14641 736 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 HRGP04196 525 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 CD8BP10966 210 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 CD79AP11912 226 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 ZNF19P17023 458 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 ALOX5APP20292 161 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 SNTB1Q13884 538 aaKnown RBP11.02□□□□□ -0.64
PMS1-204ENST00000409823 ZNF322Q6U7Q0 402 aaPredicted RBP11.02□□□□□ -0.64
PMS1-204ENST00000409823 ABHD12BQ7Z5M8 362 aaPredicted RBP11.02□□□□□ -0.64
PMS1-204ENST00000409823 GALNT11Q8NCW6 608 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 SLC7A6Q92536 515 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 C4orf36Q96KX1 117 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 CHCHD3Q9NX63 227 aaKnown RBP11.02□□□□□ -0.64
PMS1-204ENST00000409823 GDF2Q9UK05 429 aaPredicted RBP11.02□□□□□ -0.64
PMS1-204ENST00000409823 GNG8Q9UK08 70 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 ERGIC3Q9Y282 383 aa11.02□□□□□ -0.64
PMS1-204ENST00000409823 A0A087WXM4 84 aa11.02□□□□□ -0.65
PMS1-204ENST00000409823 A8MXE2 369 aa11.02□□□□□ -0.65
PMS1-204ENST00000409823 MYL12BO14950 172 aa11.02□□□□□ -0.65
PMS1-204ENST00000409823 INMTO95050 263 aa11.02□□□□□ -0.65
PMS1-204ENST00000409823 RPP14O95059 124 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms