RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ABHD16AO95870 558 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 YES1P07947 543 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 GDI2P50395 445 aaKnown RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF84P51523 738 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 NANOS3P60323 173 aaKnown RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 CDK5R1Q15078 307 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 RNPS1Q15287 305 aaKnown RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 ODF4Q2M2E3 257 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 C10orf128Q5T292 105 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 TSPO2Q5TGU0 170 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 DMKNQ6E0U4 476 aaPredicted RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 CFAP77Q6ZQR2 320 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 OR13C5Q8NGS8 318 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 OR2AJ1Q8NGZ0 328 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 INTS12Q96CB8 462 aaKnown RBP11□□□□□ -0.65
CHMP3-204ENST00000409727 MAP6Q96JE9 813 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 PDCD1LG2Q9BQ51 273 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 C12orf49Q9H741 205 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 CYB5R1Q9UHQ9 305 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 LHFPL6Q9Y693 200 aa11□□□□□ -0.65
CHMP3-204ENST00000409727 PHF3Q92576 2039 aaKnown RBP10.99□□□□□ -0.65
CHMP3-204ENST00000409727 TRIM64BA6NI03 449 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 H3BSH0 61 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 GABRPO00591 440 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 PLPP2O43688 288 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 SULT1C4O75897 302 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 CRYABP02511 175 aaKnown RBP10.99□□□□□ -0.65
CHMP3-204ENST00000409727 CAPZA2P47755 286 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 MXD1Q05195 221 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 C9orf135Q5VTT2 229 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF585AQ6P3V2 769 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 RPL22L1Q6P5R6 122 aaKnown RBP10.99□□□□□ -0.65
CHMP3-204ENST00000409727 KCTD18Q6PI47 426 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-204ENST00000409727 FAM180AQ6UWF9 173 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 USP43Q70EL4 1123 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 NUFIP2Q7Z417 695 aaKnown RBP10.99□□□□□ -0.65
CHMP3-204ENST00000409727 KCTD20Q7Z5Y7 419 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF679Q8IYX0 411 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 TMEM45BQ96B21 275 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 SMIM19Q96E16 107 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 PGLYRP3Q96LB9 341 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF416Q9BWM5 594 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 SLCO5A1Q9H2Y9 848 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 NELFAQ9H3P2 528 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 BCO1Q9HAY6 547 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 B3GAT2Q9NPZ5 323 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 GDF2Q9UK05 429 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-204ENST00000409727 FBXL3Q9UKT7 428 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 LRP12Q9Y561 859 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 PTPRQQ9UMZ3 2332 aa10.99□□□□□ -0.65
CHMP3-204ENST00000409727 CACNA1CQ13936 2221 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 MED19A0JLT2 244 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 SMIM30A4D0T7 59 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 RER1O15258 196 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 OGG1O15527 345 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 RGS9O75916 674 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 B4GALT1P15291 398 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 MSR1P21757 451 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 ROR2Q01974 943 aaKnown RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 GPR50Q13585 617 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 PCK2Q16822 640 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 CEACAM16Q2WEN9 425 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 LINC00303Q3SY05 128 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 TEX30Q5JUR7 227 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 GCNT2Q8N0V5 402 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 UBE2J2Q8N2K1 259 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 CISD2Q8N5K1 135 aaKnown RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 APH1AQ96BI3 265 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 SLAMF6Q96DU3 332 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 C1orf198Q9H425 327 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 GPR35Q9HC97 309 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 SLC7A10Q9NS82 523 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 PARPBPQ9NWS1 579 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 GALNT8Q9NY28 637 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 FRRS1LQ9P0K9 344 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF724A8MTY0 619 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 DOK2O60496 412 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 HLA-DPB1P04440 258 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 H2BFMP0C1H6 154 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 FCGR2AP12318 317 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF133P52736 654 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 RIDAP52758 137 aaKnown RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 MFGE8Q08431 387 aaPredicted RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 CCDC58Q4VC31 144 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 RPUSD3Q6P087 351 aaKnown RBP10.98□□□□□ -0.65
CHMP3-204ENST00000409727 TMEM91Q6ZNR0 172 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 FGD2Q7Z6J4 655 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 DYNC2LI1Q8TCX1 351 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 NABP1Q96AH0 204 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 TPK1Q9H3S4 243 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 BRD7Q9NPI1 651 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms