RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IDO2Q6ZQW0 420 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 CD300AQ9UGN4 299 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 TRGV5A0A0B4J1U4 118 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 GABRPO00591 440 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 EIF1BO60739 113 aaKnown RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 SLCO2B1O94956 709 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 TRMT12Q53H54 448 aaKnown RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF705AQ6ZN79 300 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 GALNT16Q8N428 558 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 PACRGLQ8N7B6 248 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 GJC3Q8NFK1 279 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 MFFQ9GZY8 342 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 SAGE1Q9NXZ1 904 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 RCE1Q9Y256 329 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 IGHV3OR16-12A0A075B7B8 117 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 PMS2P1A4D2B8 440 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 OPRM1P35372 400 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 MFGE8Q08431 387 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 CLN3Q13286 438 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 CRMP1Q14194 572 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 OR1C1Q15619 314 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 NXNL2Q5VZ03 156 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 TGIF2LXQ8IUE1 241 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 AKR7LQ8NHP1 331 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 LAMB4A4D0S4 1761 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 AKAP11Q9UKA4 1901 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 NTF3P20783 257 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 IVDP26440 423 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF252P-AS1Q0IIN9 211 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 PGGHGQ32M88 737 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 WIPI1Q5MNZ9 446 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM135Q86UB9 458 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 DDX60Q8IY21 1712 aaKnown RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 K7EQS6 105 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 CCSO14618 274 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 CSF1P09603 554 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 OR13C7P0DN81 318 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 IMPA1P29218 277 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 ERHP84090 104 aaKnown RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 HSF1Q00613 529 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 CDK5R2Q13319 367 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 SELPLGQ14242 412 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 FAM69AQ5T7M9 428 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 SPINK14Q6IE38 97 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 MAML2Q8IZL2 1156 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 OR2T6Q8NHC8 308 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 SARAFQ96BY9 339 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 L3HYPDHQ96EM0 354 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 GNRHR2Q96P88 292 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 POU3F3P20264 500 aaPredicted RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 RPS27P42677 84 aaKnown RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 HAAOP46952 286 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 FGF22Q9HCT0 170 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 OR52A1Q9UKL2 312 aa7.7□□□□□ -1.18
SCN9A-203ENST00000409672 EXO1Q9UQ84 846 aaKnown RBP7.7□□□□□ -1.18
SCN9A-203ENST00000409672 DNAJC25-GNG10A0A024R161 153 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM221A6NGB7 291 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 HPRP00739 348 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 C21orf33P30042 268 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-203ENST00000409672 TEKQ02763 1124 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 MAMSTRQ6ZN01 415 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 NLRP8Q86W28 1048 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 UBALD2Q8IYN6 164 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 OR51E1Q8TCB6 317 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 ASB17Q8WXJ9 295 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 CDX2Q99626 313 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-203ENST00000409672 PCOLCE2Q9UKZ9 415 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 KIAA1217Q5T5P2 1943 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 GFYI3L273 518 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 M0R296 226 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 ST6GAL1P15907 406 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 HTR2CP28335 458 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 METTL11BQ5VVY1 283 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 GLIPR1L1Q6UWM5 242 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 OR1M1Q8NGA1 313 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 RTP4Q96DX8 246 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 OSGIN1Q9UJX0 560 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 TPRP12270 2363 aaKnown RBP7.69□□□□□ -1.18
SCN9A-203ENST00000409672 TSTD3H0UI37 97 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 M0R082 166 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 LYRM1O43325 122 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 TAS2R31P59538 309 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 LRRC10Q5BKY1 277 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 RANBP10Q6VN20 620 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 SLC35F3Q8IY50 421 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 OR5B3Q8NH48 314 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 ASIC5Q9NY37 505 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 SPAARA0A1B0GVQ0 90 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 GAPDHSO14556 408 aaPredicted RBP7.69□□□□□ -1.18
SCN9A-203ENST00000409672 OR3A4PP47883 348 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 PRSS12P56730 875 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 RAB41Q5JT25 222 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 FAM109AQ8N4B1 249 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 HDAC8Q9BY41 377 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 ZCCHC4Q9H5U6 513 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 HBG1P69891 147 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 HBG2P69892 147 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 C1orf140Q5VVS0 124 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM268Q5VZI3 342 aa7.69□□□□□ -1.18
SCN9A-203ENST00000409672 GABRG1Q8N1C3 465 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms