RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CD3GP09693 182 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ARPC4P59998 168 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 SLC35A2P78381 396 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 C4orf46Q504U0 113 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 TMEM53Q6P2H8 277 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 PGAP1Q75T13 922 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 MUL1Q969V5 352 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ADIPOR1Q96A54 375 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 NEDD4LQ96PU5 975 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 KLHDC3Q9BQ90 382 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 BANF2Q9H503 90 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 GPR173Q9NS66 373 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 TREM2Q9NZC2 230 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 CMAHPQ9Y471 501 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 CHST2Q9Y4C5 530 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 HELZP42694 1942 aaKnown RBP10.21□□□□□ -0.77
SNX13-202ENST00000409604 ADAM11O75078 769 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 MSR1P21757 451 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 CFL1P23528 166 aaKnown RBP10.21□□□□□ -0.77
SNX13-202ENST00000409604 APEX1P27695 318 aaKnown RBP10.21□□□□□ -0.77
SNX13-202ENST00000409604 CD79BP40259 229 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 CDC20Q12834 499 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 CCDC71Q8IV32 467 aaPredicted RBP10.21□□□□□ -0.77
SNX13-202ENST00000409604 OR51T1Q8NGJ9 327 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 TSPAN32Q96QS1 320 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 NPAS1Q99742 590 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 ABHD6Q9BV23 337 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 ACTR6Q9GZN1 396 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 SMURF1Q9HCE7 757 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 IL20Q9NYY1 176 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 HDGFL3Q9Y3E1 203 aa10.21□□□□□ -0.77
SNX13-202ENST00000409604 ANKRD30BLA7E2S9 258 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 EFSO43281 561 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 GTF2F2P13984 249 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 DUSP1P28562 367 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 OPRL1P41146 370 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 CX3CR1P49238 355 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 GABARAPL2P60520 117 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 RAB1AP62820 205 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 C19orf57Q0VDD7 668 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 Q8N402 240 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 OR2M3Q8NG83 312 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 OR51D1Q8NGF3 324 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 GINS4Q9BRT9 223 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 NARFLQ9H6Q4 476 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 GLTPQ9NZD2 209 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 OR52A1Q9UKL2 312 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 PCDH15Q96QU1 1955 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 PRR19A6NJB7 356 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 PYCARD-AS1I3L0S3 204 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 AGFG2O95081 481 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 PCSK6P29122 969 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 AP2S1P53680 142 aaPredicted RBP10.21□□□□□ -0.78
SNX13-202ENST00000409604 C21orf58P58505 322 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 RAC1P63000 192 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 RAB11BQ15907 218 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 PRSS33Q8NF86 280 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 GJC3Q8NFK1 279 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 HPS1Q92902 700 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 ZBTB8AQ96BR9 441 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 ABHD17AQ96GS6 310 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 LIN37Q96GY3 246 aaPredicted RBP10.21□□□□□ -0.78
SNX13-202ENST00000409604 ICAM5Q9UMF0 924 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 CSAG2Q9Y5P2 127 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 MYLKQ15746 1914 aa10.21□□□□□ -0.78
SNX13-202ENST00000409604 SRD5A2P31213 254 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 FXYD4P59646 89 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 SEC61A1P61619 476 aaKnown RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 ZFP36L1Q07352 338 aaKnown RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 XAF1Q6GPH4 301 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 TRAPPC6BQ86SZ2 158 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 ATG4DQ86TL0 474 aaPredicted RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 ZSCAN4Q8NAM6 433 aaPredicted RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 CTHRC1Q96CG8 243 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 SIGLEC11Q96RL6 698 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 CNOT2Q9NZN8 540 aaKnown RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 FITM1A5D6W6 292 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 VAMP5O95183 116 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 UCHL1P09936 223 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 NAGAP17050 411 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 TMBIM6P55061 237 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 CDNFQ49AH0 187 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 ZNF774Q6NX45 483 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 BORAQ6PGQ7 559 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 TMEM17Q86X19 198 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 FAM26EQ8N5C1 309 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 DDA1Q9BW61 102 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 ABCA2Q9BZC7 2435 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 M0R135 149 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 RAMP1O60894 148 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 KLF7O75840 302 aaPredicted RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 PIPP12273 146 aaPredicted RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 RAB3AP20336 220 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 HLA-DMAP28067 261 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 TBCEQ15813 527 aaPredicted RBP10.2□□□□□ -0.78
SNX13-202ENST00000409604 C5orf46Q6UWT4 87 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 SLC15A4Q8N697 577 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 OR5D14Q8NGL3 314 aa10.2□□□□□ -0.78
SNX13-202ENST00000409604 MFSD8Q8NHS3 518 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms