RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 WNT5AP41221 380 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 GPR139Q6DWJ6 353 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 C16orf89Q6UX73 402 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 C1orf174Q8IYL3 243 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 ICA1LQ8NDH6 482 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 OR52J3Q8NH60 311 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 RSRC1Q96IZ7 334 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 NSMCE2Q96MF7 247 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF416Q9BWM5 594 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 KCNS2Q9ULS6 477 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 V9GYQ6 96 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 TEX13CA0A0J9YWL9 993 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 UNC119BA6NIH7 251 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 ARPC2O15144 300 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 ICMTO60725 284 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 GADD45GO95257 159 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 IGHV3-13P01766 116 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 SCG5P05408 212 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 ACHEP22303 614 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 COL8A2P25067 703 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 KRR1Q13601 381 aaKnown RBP16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 PCGF3Q3KNV8 242 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 ALKBH6Q3KRA9 238 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF774Q6NX45 483 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 TMEM154Q6P9G4 183 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 THSD4Q6ZMP0 1018 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 DPY19L2P2Q6ZN68 376 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF101Q8IZC7 436 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 SNX33Q8WV41 574 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 MCUR1Q96AQ8 359 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 RASD2Q96D21 266 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 MDFIQ99750 246 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 BEX2Q9BXY8 128 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 NKIRAS2Q9NYR9 191 aa16.77■□□□□ 0.28
TSPAN4-209ENST00000409543 NCR1O76036 304 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 TGFAP01135 160 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 MAGEB1P43366 347 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 MNAT1P51948 309 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 TMEM33P57088 247 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 FXYD6P3P58550 94 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 TRIP10Q15642 601 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 ZNF718Q3SXZ3 478 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 UGT2A3Q6UWM9 527 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 ADCK1Q86TW2 530 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 DEFB107AQ8IZN7 70 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 MARS2Q96GW9 593 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 SNX18Q96RF0 628 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 GPA33Q99795 319 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 SOX7Q9BT81 388 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 SHARPINQ9H0F6 387 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 EMC7Q9NPA0 242 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 VSX1Q9NZR4 365 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 IL20RAQ9UHF4 553 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 IER3IP1Q9Y5U9 82 aa16.76■□□□□ 0.27
TSPAN4-209ENST00000409543 FBN1P35555 2871 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 TXNDC12O95881 172 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 MT-ND5P03915 603 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 COX5BP10606 129 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 CTLA4P16410 223 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 IGFBP5P24593 272 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 GCH1P30793 250 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 IL2RGP31785 369 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 GPR6P46095 362 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 RPS6KA3P51812 740 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 MXRA7P84157 204 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 SPIBQ01892 262 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 SMARCD3Q6STE5 483 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 ZER1Q7Z7L7 766 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 YIPF5Q969M3 257 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 C1orf159Q96HA4 380 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 SYT4Q9H2B2 425 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 IL1RAPQ9NPH3 570 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 NDRG4Q9ULP0 352 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 COL6A5A8TX70 2615 aa16.75■□□□□ 0.27
TSPAN4-209ENST00000409543 SOCS2O14508 198 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 SLC16A7O60669 478 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 KHDRBS3O75525 346 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 RP2O75695 350 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 FABP3P05413 133 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 SCRN3Q0VDG4 424 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 SPATA46Q5T0L3 261 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 MBNL2Q5VZF2 373 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 ARL9Q6T311 187 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 RFPL4BQ6ZWI9 263 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 GLB1L2Q8IW92 636 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 SLC25A40Q8TBP6 338 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 KLF14Q8TD94 323 aaPredicted RBP16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 C4orf45Q96LM5 186 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 CCT8L2Q96SF2 557 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 ELOVL3Q9HB03 270 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 ZNF275Q9NSD4 429 aaPredicted RBP16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 MXRA5Q9NR99 2828 aa16.74■□□□□ 0.27
TSPAN4-209ENST00000409543 H3BSA7 217 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 NGFP01138 241 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 FPR3P25089 353 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 IFNGR2P38484 337 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 MPV17P39210 176 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 ARHGDIAP52565 204 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 PPP1CBP62140 327 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms