RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ANKRD33BA6NCL7 494 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 GOSR2O14653 212 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 RRAS2P62070 204 aaPredicted RBP15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 PRICKLE4Q2TBC4 344 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 OR4M1Q8NGD0 313 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 FNDC9Q8TBE3 224 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 UPRTQ96BW1 309 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 OR2S2Q9NQN1 319 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 DOCK3Q8IZD9 2030 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 F5H5P2 479 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 FAM219BQ5XKK7 198 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 LINC00346Q8IVM7 164 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 OR56B4Q8NH76 319 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 C7orf34Q96L11 122 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 AKIP1Q9NQ31 210 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 FBXL4Q9UKA2 621 aa15.26■□□□□ 0.03
PCDHA13-202ENST00000409494 DOCK5Q9H7D0 1870 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 M0R036 132 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 MPPED1O15442 326 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 CNOT4O95628 575 aaKnown RBP15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 TMEM211Q6ICI0 200 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 ZNF321PQ8N8H1 164 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 OR4N2Q8NGD1 307 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 TECTBQ96PL2 329 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 OCSTAMPQ9BR26 566 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 RAB33BQ9H082 229 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 BCO1Q9HAY6 547 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 HRH3Q9Y5N1 445 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 CD300LBA8K4G0 201 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 NXPH2O95156 264 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 GP1BAP07359 652 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 AVPR2P30518 371 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 GABRA2P47869 451 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 DLX5P56178 289 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 SQSTM1Q13501 440 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 PLGLAQ15195 96 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 PRTGQ2VWP7 1150 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 SFXN4Q6P4A7 337 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 OLIG3Q7RTU3 272 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 C1orf87Q8N0U7 546 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 BEST4Q8NFU0 473 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 PRR14Q9BWN1 585 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 PRMT8Q9NR22 394 aaPredicted RBP15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 KIF13BQ9NQT8 1826 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 P2RY10O00398 339 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 RAD52P43351 418 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 ZNF141Q15928 474 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 ADGRE4PQ86SQ3 457 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 SLAMF6Q96DU3 332 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 HINT3Q9NQE9 182 aaKnown RBP15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 B3GNT2Q9NY97 397 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 ACOD1A6NK06 481 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 IFNA2P01563 188 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 SHC1P29353 583 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 SRD5A2P31213 254 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 ZNF766Q5HY98 468 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 LIPNQ5VXI9 398 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 KIRREL2Q6UWL6 708 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 SLC25A46Q96AG3 418 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 TRIB1Q96RU8 372 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 NKX3-1Q99801 234 aaPredicted RBP15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 BARHL1Q9BZE3 327 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 PPA2Q9H2U2 334 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 NOX3Q9HBY0 568 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 GLTPQ9NZD2 209 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 DUSP13Q9UII6 198 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 RCE1Q9Y256 329 aa15.25■□□□□ 0.03
PCDHA13-202ENST00000409494 LOC100289279A0A1B0GTE1 492 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 GPX5O75715 221 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 CALCBP10092 127 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 EPHA2P29317 976 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 FXYD4P59646 89 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 IKZF1Q13422 519 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 TSPAN10Q9H1Z9 355 aaPredicted RBP15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 RGCCQ9H4X1 137 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 C12orf49Q9H741 205 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 ZNF391Q9UJN7 358 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 TRAPPC2LQ9UL33 140 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 CTXN2P0C2S0 81 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 SFTPCP11686 197 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 HIST1H1CP16403 213 aaKnown RBP15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 GPATCH2Q9NW75 528 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 A0A1W2PQD3 144 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 PEX14O75381 377 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 CBX7O95931 251 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 FOXF1Q12946 379 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 SHBQ15464 509 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 CTF1Q16619 201 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 MRM1Q6IN84 353 aaKnown RBP15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 TP53TG5Q9Y2B4 290 aa15.24■□□□□ 0.03
PCDHA13-202ENST00000409494 KIR2DS1A0A191URI9 304 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 A0A1W2PNR3 127 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 KNG1P01042 644 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 IGHV4-34P06331 123 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 TRAPPC2P0DI81 140 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 TRAPPC2BP0DI82 140 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 TGFBR1P36897 503 aa15.23■□□□□ 0.03
PCDHA13-202ENST00000409494 DDOSTP39656 456 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms