RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 TMEM215Q68D42 235 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 BRICD5Q6PL45 260 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 HMGN2P46Q86SG4 172 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SLC51BQ86UW2 128 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FAM217AQ8IXS0 508 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 OR51A7Q8NH64 312 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 YIPF5Q969M3 257 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF442Q9H7R0 627 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 WDR54Q9H977 334 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SLCO1C1Q9NYB5 712 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 IL17BQ9UHF5 180 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 MYH7BA7E2Y1 1941 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FAM159BA6NKW6 160 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PHYHO14832 338 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 THBS1P07996 1170 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 AKAIN1P0CW23 69 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SPP1P10451 314 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CD59P13987 128 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 NFYAP23511 347 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 P2RX1P51575 399 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ODF4Q2M2E3 257 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PCGF3Q3KNV8 242 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 LFNGQ8NES3 379 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 OR8U1Q8NH10 309 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FBXO27Q8NI29 283 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 TTC9Q92623 222 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PERPQ96FX8 193 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 C3orf30Q96M34 536 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ACOT13Q9NPJ3 140 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FOXJ2Q9P0K8 574 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 K7ESF4 209 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 EIF4E2O60573 245 aaKnown RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 RPS26P62854 115 aaKnown RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 TATDN3Q17R31 274 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 C18orf21Q32NC0 220 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 VWA1Q6PCB0 445 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ZSWIM9Q86XI8 627 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PTOV1Q86YD1 416 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CPNE8Q86YQ8 564 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SLC25A45Q8N413 288 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 L3MBTL4Q8NA19 623 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 BPIFA2Q96DR5 249 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 LYSMD1Q96S90 227 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SEMA4CQ9C0C4 833 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PRAMEF27A3QJZ7 478 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 SERINC4A6NH21 518 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 KNG1P01042 644 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 OR8G1Q15617 311 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 RAB11BQ15907 218 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 SLC27A4Q6P1M0 643 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 THSD4Q6ZMP0 1018 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 SLC35D2Q76EJ3 337 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 CA13Q8N1Q1 262 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 MS4A15Q8N5U1 240 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 OR6T1Q8NGN1 323 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 WWTR1Q9GZV5 400 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 MYH7P12883 1935 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 I6L893 689 aaPredicted RBP6.65□□□□□ -1.34
SCN9A-202ENST00000409435 GPR39O43194 453 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 WISP1O95388 367 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 IGFBP1P08833 259 aaPredicted RBP6.65□□□□□ -1.34
SCN9A-202ENST00000409435 FGF3P11487 239 aaPredicted RBP6.65□□□□□ -1.34
SCN9A-202ENST00000409435 PDLIM4P50479 330 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 MEF2DQ14814 521 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 CNN3Q15417 329 aaKnown RBP6.65□□□□□ -1.34
SCN9A-202ENST00000409435 LEG1Q6P5S2 330 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 HACD2Q6Y1H2 254 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 GDPD3Q7L5L3 318 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 S100A7AQ86SG5 101 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 OR9I1Q8NGQ6 314 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 CNIH3Q8TBE1 160 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 SLC26A1Q9H2B4 701 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 PLK3Q9H4B4 646 aa6.65□□□□□ -1.34
SCN9A-202ENST00000409435 SLC1A7O00341 560 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 CHEK1O14757 476 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 EDN3P14138 238 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 PRSS3P35030 304 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 BTG2P78543 158 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 CLN3Q13286 438 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 GPNMBQ14956 572 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 MOB3CQ70IA8 216 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 TMEM150AQ86TG1 271 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.65□□□□□ -1.35
SCN9A-202ENST00000409435 ROBO4Q8WZ75 1007 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 SDSLQ96GA7 329 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 PRRT1Q99946 306 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 VN1R1Q9GZP7 353 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 SLC35D1Q9NTN3 355 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 PCDHA9Q9Y5H5 950 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 LIPGQ9Y5X9 500 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 LOC101059948A0A1B0GTJ6 334 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 METTL15A6NJ78 407 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF25P17030 456 aaPredicted RBP6.65□□□□□ -1.35
SCN9A-202ENST00000409435 HOXD11P31277 338 aaPredicted RBP6.65□□□□□ -1.35
SCN9A-202ENST00000409435 TPPP2P59282 170 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 PRR27Q6MZM9 219 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 CNIH2Q6PI25 160 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 MKXQ8IYA7 352 aa6.65□□□□□ -1.35
SCN9A-202ENST00000409435 MAML2Q8IZL2 1156 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms