RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MMP28Q9H239 520 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 A0A0G2JMM0 328 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 A0A1W2PPB8 328 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 A0A1W2PRS3 328 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 KIR3DP1A8MWS1 328 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 LYRM1O43325 122 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 RAD1O60671 282 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 MAS1P04201 325 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 ADRA2CP18825 462 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 SRD5A2P31213 254 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 CYB561P49447 251 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 RAC1P63000 192 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 CSNK2A1P68400 391 aaPredicted RBP21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 ITPKCQ96DU7 683 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 ABHD1Q96SE0 405 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 SEC61A2Q9H9S3 476 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 EMC9Q9Y3B6 208 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 TRAV8-7A0A075B6U6 113 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 GJE1A6NN92 205 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 UBL3O95164 117 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 CLDN17P56750 224 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 H3F3AP84243 136 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 OC90Q02509 493 aaPredicted RBP21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 SLC25A47Q6Q0C1 308 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 AKAP14Q86UN6 197 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 MCHR2Q969V1 340 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 LIN7BQ9HAP6 207 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 RBFOX1Q9NWB1 397 aaKnown RBP21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 STMN3Q9NZ72 180 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 FBXL3Q9UKT7 428 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 DHDHQ9UQ10 334 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 CAMK2AQ9UQM7 478 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 MRPS7Q9Y2R9 242 aaKnown RBP21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 KMT2EQ8IZD2 1858 aa21.96■■□□□ 1.11
DNMT3A-206ENST00000406659 EIF1AYO14602 144 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 TFECO14948 347 aaPredicted RBP21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 EEF1E1O43324 174 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 SRSF10O75494 262 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 TNFSF15O95150 251 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 CALCBP10092 127 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 KIR2DL3P43628 341 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 LRFN4Q6PJG9 635 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 UBQLNLQ8IYU4 475 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 CMTM4Q8IZR5 234 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 RNF133Q8WVZ7 376 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 PSMF1Q92530 271 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 CYB5R1Q9UHQ9 305 aa21.95■■□□□ 1.1
DNMT3A-206ENST00000406659 EIF1AXP47813 144 aaKnown RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 AGAP6Q5VW22 663 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 JMJD6Q6NYC1 403 aaPredicted RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 FCRLAQ7L513 359 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 TMPRSS12Q86WS5 348 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 OR14L1PQ8NHC6 308 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 CHAC2Q8WUX2 184 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 SLAMF6Q96DU3 332 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 AGAP4Q96P64 663 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 C1orf198Q9H425 327 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 RABL2AQ9UBK7 228 aaPredicted RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 OR52A1Q9UKL2 312 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 RABL2BQ9UNT1 228 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 POLR1DQ9Y2S0 133 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 MRPS18BQ9Y676 258 aaKnown RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 PCSK5Q92824 1860 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 VAMP5O95183 116 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 QDPRP09417 244 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 CLDN12P56749 244 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 TRIP6Q15654 476 aaKnown RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 HACD4Q5VWC8 232 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 YRDCQ86U90 279 aaKnown RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 SUMF1Q8NBK3 374 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 DNAAF1Q8NEP3 725 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 OR2AJ1Q8NGZ0 328 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 ZC3HAV1LQ96H79 300 aaKnown RBP21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 ZFP3Q96NJ6 502 aa21.94■■□□□ 1.1
DNMT3A-206ENST00000406659 MED12Q93074 2177 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 A0A0J9YW62 118 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 LOC101059948A0A1B0GTJ6 334 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 FAM240BA0A1B0GVZ2 78 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 TMEM269A0A1B0GVZ9 245 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 TERTO14746 1132 aaKnown RBP21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 TNFSF11O14788 317 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 LANCL1O43813 399 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 NR2C1P13056 603 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 HIST3H3Q16695 136 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 KLHL24Q6TFL4 600 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 ZNF704Q6ZNC4 412 aaPredicted RBP21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 ESPNLQ6ZVH7 1005 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 ASB18Q6ZVZ8 466 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 EMC7Q9NPA0 242 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 NPAP1Q9NZP6 1156 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 OR5V1Q9UGF6 321 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 CFAP54Q96N23 3096 aa21.93■■□□□ 1.1
DNMT3A-206ENST00000406659 IGHV3-15A0A0B4J1V0 119 aa21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 NPIPA2E9PIF3 369 aa21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 NPIPA3F8WFD2 350 aa21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 CD2P06729 351 aa21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 EIF2B2P49770 351 aaKnown RBP21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 MMP15P51511 669 aa21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 TPTEP56180 551 aa21.92■■□□□ 1.1
DNMT3A-206ENST00000406659 B3GALT5-AS1P59052 145 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms