RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 THSD7BQ9C0I4 1608 aa3.59□□□□□ -1.84
HMGB1P13-201ENST00000406019 KIR2DL5BA0A0G2JN68 375 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 KIR2DL5BA0A0G2JPC4 375 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 A0A1B0GVG6 124 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RAB19A4D1S5 217 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RBMY1BA6NDE4 496 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RBMY1EA6NEQ0 496 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 GATCO43716 136 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 EIF4E2O60573 245 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 BRI3O95415 125 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 TIMP1P01033 207 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 HMGN1P05114 100 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RBMY1DP0C7P1 496 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RBMY1A1P0DJD3 496 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 PTNP21246 168 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 HMOX2P30519 316 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 HOXA9P31269 272 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CLDN18P56856 261 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 YWHAEP62258 255 aaKnown RBP3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 SELENOTP62341 195 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF45Q02386 682 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 PMS2P3Q13401 168 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 ART3Q13508 389 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 KIAA0040Q15053 153 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 ATP6AP1Q15904 470 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 FAM83EQ2M2I3 478 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 MARC1Q5VT66 337 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 STUMQ69YW2 141 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 TMEM135Q86UB9 458 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 SPAG16Q8N0X2 631 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 KIR2DL5AQ8N109 375 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 PDIK1LQ8N165 341 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 ARHGAP18Q8N392 663 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 KIR2DL5BQ8NHK3 375 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RHOXF1Q8NHV9 184 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 RHEBL1Q8TAI7 183 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 NDNFQ8TB73 568 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 MRAPQ8TCY5 172 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 C7orf33Q8WU49 177 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 DYDC1Q8WWB3 177 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CACNG8Q8WXS5 425 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 ING5Q8WYH8 240 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CEP170P1Q96L14 293 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CNPY3Q9BT09 278 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 NDEL1Q9GZM8 345 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 SH2D2AQ9NP31 389 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CCNB1IP1Q9NPC3 277 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 EXD2Q9NVH0 621 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 MARCH5Q9NX47 278 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 VNN3Q9NY84 501 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 MTCH1Q9NZJ7 389 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 TMEM9Q9P0T7 183 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 SLC17A4Q9Y2C5 497 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CNTNAP1P78357 1384 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 CHD4Q14839 1912 aa3.58□□□□□ -1.84
HMGB1P13-201ENST00000406019 MROH7-TTC4A0A0A0MT08 1334 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR6C70A6NIJ9 312 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 TRPC5OSA6NMA1 111 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 C12orf77C9JDV5 145 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 AGPAT2O15120 278 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 SCN2BO60939 215 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 SUPT3HO75486 399 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 EEDO75530 441 aaKnown RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 CD3GP09693 182 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 AQP2P41181 271 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 KIR3DL2P43630 455 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 GPR6P46095 362 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR3A4PP47883 348 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 NOVP48745 357 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 SERPINB9P50453 376 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 P2RY4P51582 365 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 YWHAGP61981 247 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 CSNK1G2P78368 415 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 GLO1Q04760 184 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 ACVR1Q04771 509 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 MN1Q10571 1320 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 PDIA2Q13087 525 aaKnown RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 GPNMBQ14956 572 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 NDUFA5Q16718 116 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 RFX7Q2KHR2 1363 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 HNRNPA1L2Q32P51 320 aaKnown RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 DNAL1Q4LDG9 190 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 PPM1LQ5SGD2 360 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR52W1Q6IF63 320 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 CCDC171Q6TFL3 1326 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 RTL4Q6ZR62 310 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 RFLNAQ6ZTI6 216 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 DCXRQ7Z4W1 244 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 VN1R2Q8NFZ6 395 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR2AP1Q8NGE2 309 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 ABCC11Q96J66 1382 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 DNAJC1Q96KC8 554 aaKnown RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZNF317Q96PQ6 595 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 XPO6Q96QU8 1125 aaKnown RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 KCNS3Q9BQ31 491 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 EBF4Q9BQW3 602 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 NAT9Q9BTE0 207 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 LHX5Q9H2C1 402 aa3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 ZSCAN16Q9H4T2 348 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P13-201ENST00000406019 PARVBQ9HBI1 364 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms