RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 PSMB3P49720 205 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 CDK5R1Q15078 307 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 GLIPR1L1Q6UWM5 242 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 ATF6BQ99941 703 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 SLAMF7Q9NQ25 335 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 SLC23A2Q9UGH3 650 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 TRAPPC2LQ9UL33 140 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 NTNG1Q9Y2I2 539 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 EPXP11678 715 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 SYT9Q86SS6 491 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 SEH1LQ96EE3 360 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 OR14J1Q9UGF5 321 aa12.23□□□□□ -0.45
SNED1-205ENST00000405547 HOXC11O43248 304 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 B4GALT3O60512 393 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 TSPAN12O95859 305 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 FOSL1P15407 271 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 SSTP61278 116 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 OLIG3Q7RTU3 272 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 LMAN1LQ9HAT1 526 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 CYSLTR2Q9NS75 346 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 TMEM30AQ9NV96 361 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 CGGBP1Q9UFW8 167 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 PTGER4P35408 488 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 F2RL1P55085 397 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 DCDP81605 110 aaKnown RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 PLGLAQ15195 96 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 SMIM4Q8WVI0 70 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 DAZAP1Q96EP5 407 aaKnown RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 KIRREL1Q96J84 757 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 PCYT1BQ9Y5K3 369 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 CMTM4Q8IZR5 234 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 HHIPQ96QV1 700 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 UBL7Q96S82 380 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 ACAD8Q9UKU7 415 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 PRSS44E7EML9 344 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 GPR171O14626 319 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 SLC2A10O95528 541 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 YOD1Q5VVQ6 348 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 OR51B6Q9H340 312 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 ST8SIA3O43173 380 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 XRCC3O43542 346 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 TMPRSS11DO60235 418 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 GDF1P27539 372 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 HNF4GQ14541 408 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 ELAVL1Q15717 326 aaKnown RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 HSD17B11Q8NBQ5 300 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 OR2AK2Q8NG84 335 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 CLDN1O95832 211 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 TPOP07202 933 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 FGF9P31371 208 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 C17orf107Q6ZR85 190 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 LURAP1Q96LR2 239 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 ELF4Q99607 663 aaPredicted RBP12.22□□□□□ -0.45
SNED1-205ENST00000405547 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 ANK1P16157 1881 aa12.22□□□□□ -0.45
SNED1-205ENST00000405547 BSGP35613 385 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 TRMT12Q53H54 448 aaKnown RBP12.21□□□□□ -0.45
SNED1-205ENST00000405547 SSX9Q7RTT3 188 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 SFT2D1Q8WV19 159 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 TXN2Q99757 166 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 KCNIP2Q9NS61 270 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 WDR81Q562E7 1941 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 MPPED1O15442 326 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 OLFM2O95897 454 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 APOBEC1P41238 236 aaKnown RBP12.21□□□□□ -0.45
SNED1-205ENST00000405547 RAD52P43351 418 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.45
SNED1-205ENST00000405547 CCDC71Q8IV32 467 aaPredicted RBP12.21□□□□□ -0.45
SNED1-205ENST00000405547 TMEM217Q8N7C4 229 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 EXO1Q9UQ84 846 aaKnown RBP12.21□□□□□ -0.45
SNED1-205ENST00000405547 PIGLQ9Y2B2 252 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 TNFRSF10CO14798 259 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 OR52W1Q6IF63 320 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 LANCL3Q6ZV70 420 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 DOK3Q7L591 496 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 ARIH2OSQ8N7S6 290 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 ZBP1Q9H171 429 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 CHRNA9Q9UGM1 479 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 PADI1Q9ULC6 663 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 TMX2-CTNND1H3BSU7 103 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 CYB5BO43169 146 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 AKR7A2O43488 359 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 ETHE1O95571 254 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 ADAM5Q6NVV9 412 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 GABRG1Q8N1C3 465 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 CMTM3Q96MX0 182 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 PCDHGA5Q9Y5G8 931 aa12.21□□□□□ -0.45
SNED1-205ENST00000405547 A0A087WZY1 265 aa12.21□□□□□ -0.46
SNED1-205ENST00000405547 EPHA4P54764 986 aa12.21□□□□□ -0.46
SNED1-205ENST00000405547 PHLDA2Q53GA4 152 aa12.21□□□□□ -0.46
SNED1-205ENST00000405547 AAED1Q7RTV5 226 aa12.21□□□□□ -0.46
SNED1-205ENST00000405547 RABEPKQ7Z6M1 372 aa12.21□□□□□ -0.46
SNED1-205ENST00000405547 FJX1Q86VR8 437 aa12.21□□□□□ -0.46
SNED1-205ENST00000405547 OR2G3Q8NGZ4 309 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms