RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TMED7-TICAM2A0A0A6YYA0 188 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 A0A1B0GW55 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 NUDT21O43809 227 aaKnown RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 OR2T1O43869 369 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 PLGP00747 810 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 FGF2P09038 288 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4L2P0CJ85 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4L3P0CJ86 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4L4P0CJ87 422 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4L5P0CJ88 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4L6P0CJ89 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4L7P0CJ90 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 CTLA4P16410 223 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 PPM1FP49593 454 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DLX2Q07687 328 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 PLCXD2Q0VAA5 305 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 KCNAB1Q14722 419 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 GLYATL3Q5SZD4 288 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 C1orf140Q5VVS0 124 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 LPCAT3Q6P1A2 487 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 TTLL10Q6ZVT0 673 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 ADGRE4PQ86SQ3 457 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 OR5M9Q8NGP3 310 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 OR52N5Q8NH56 324 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 LHFPL5Q8TAF8 219 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DAZLQ92904 295 aaKnown RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DVL3Q92997 716 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 ZDHHC12Q96GR4 267 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 SLC25A44Q96H78 314 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 NUDT9Q9BW91 350 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 CHST6Q9GZX3 395 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 SHARPINQ9H0F6 387 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 KCNK15Q9H427 330 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DUX4Q9UBX2 424 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 HHLA2Q9UM44 414 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 TMED7Q9Y3B3 224 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 LRP12Q9Y561 859 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 R4GMQ9 66 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 TRANK1O15050 2925 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 TCRBV16S1A1N1A0A5B0 115 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 PLPP3O14495 311 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 LDLRAD4O15165 306 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 GMFGO60234 142 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 DOK2O60496 412 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 CYB5AP00167 134 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 CD74P04233 296 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 ISG15P05161 165 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 MPGP29372 298 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 PTGS2P35354 604 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 NR0B1P51843 470 aaKnown RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 GFERP55789 205 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 UBE2MP61081 183 aaKnown RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 MFGE8Q08431 387 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 PXDC1Q5TGL8 231 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 ZNF660Q6AZW8 331 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 ZNF627Q7L945 461 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 GRINAQ7Z429 371 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 C9orf40Q8IXQ3 194 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 FOXRED1Q96CU9 486 aaPredicted RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 EDEM2Q9BV94 578 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 TAS2R4Q9NYW5 299 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 MSRAQ9UJ68 235 aa9.65□□□□□ -0.86
CLIP4-204ENST00000404424 TDRD6O60522 2096 aaKnown RBP9.65□□□□□ -0.86
CLIP4-204ENST00000404424 A0A0D9SG52 128 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 LOC390937A0A1W2PQ73 354 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 RAD1O60671 282 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 CD8AP01732 235 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 MGMTP16455 207 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 ACHEP22303 614 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 MAOBP27338 520 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 DNASE1L1P49184 302 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 SORDQ00796 357 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 SRSF4Q08170 494 aaKnown RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 SLC29A4Q7RTT9 530 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 C17orf82Q86X59 251 aaPredicted RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 NKAIN3Q8N8D7 197 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 ZNF248Q8NDW4 579 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 BVESQ8NE79 360 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 OR6S1Q8NH40 331 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 DUSP19Q8WTR2 217 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 PPP1R14AQ96A00 147 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 SLC25A32Q9H2D1 315 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 COPS7AQ9UBW8 275 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 MRPS18BQ9Y676 258 aaKnown RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 CDC14CA4D256 554 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 TMEM200CA6NKL6 621 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 OR6C76A6NM76 312 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 ZNF736B4DX44 427 aaPredicted RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 H3BMH7 237 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 SRSF10O75494 262 aaKnown RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 AHSA1O95433 338 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 AMY2AP04746 511 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 UBBP0CG47 229 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 UBCP0CG48 685 aaKnown RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 GLULP15104 373 aa9.64□□□□□ -0.87
CLIP4-204ENST00000404424 NME1P15531 152 aaKnown RBP9.64□□□□□ -0.87
CLIP4-204ENST00000404424 RAB6AP20340 208 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms