RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 WACQ9BTA9 647 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 VCX3BQ9H321 246 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 CCNB1IP1Q9NPC3 277 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 IGHV1-18A0A0C4DH31 117 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP25.54■■□□□ 1.68
USP42-202ENST00000404008 TVP23AA6NH52 213 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 M0R1B8 84 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 RAB36O95755 333 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 ZNF32P17041 273 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 PCBD1P61457 104 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 APOFQ13790 326 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 NXNL2Q5VZ03 156 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 ZNF511Q8NB15 262 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 OR10H5Q8NGA6 315 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 PLPPR2Q96GM1 343 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 ESRP2Q9H6T0 727 aaKnown RBP25.54■■□□□ 1.68
USP42-202ENST00000404008 RNF121Q9H920 327 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 ASH1LQ9NR48 2969 aaKnown RBP25.54■■□□□ 1.68
USP42-202ENST00000404008 COMMD3-BMI1R4GMX3 469 aa25.54■■□□□ 1.68
USP42-202ENST00000404008 DPRXA6NFQ7 191 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 H0YJX3 145 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 GOSR1O95249 250 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 ADARB1P78563 741 aaKnown RBP25.53■■□□□ 1.68
USP42-202ENST00000404008 BSPH1Q075Z2 132 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 AQP6Q13520 282 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 NCMAPQ5T1S8 102 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 ZNF787Q6DD87 383 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 TMEM108Q6UXF1 575 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 ZNF295-AS1Q8N0V1 137 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 DEPDC4Q8N2C3 294 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 DHRSXQ8N5I4 330 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 CYGBQ8WWM9 190 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 MARVELD3Q96A59 401 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 ASH2LQ9UBL3 628 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 LHFPL6Q9Y693 200 aa25.53■■□□□ 1.68
USP42-202ENST00000404008 CELA3BP08861 270 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 ZNF823P16415 610 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 ZNF14P17017 642 aaPredicted RBP25.52■■□□□ 1.68
USP42-202ENST00000404008 LOXP28300 417 aaPredicted RBP25.52■■□□□ 1.68
USP42-202ENST00000404008 IDH3GP51553 393 aaPredicted RBP25.52■■□□□ 1.68
USP42-202ENST00000404008 NR1H2P55055 460 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 SNRPGP62308 76 aaKnown RBP25.52■■□□□ 1.68
USP42-202ENST00000404008 TTC23Q5W5X9 447 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 FBXW10Q5XX13 1052 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 MYPOPQ86VE0 399 aaPredicted RBP25.52■■□□□ 1.68
USP42-202ENST00000404008 ZMYND19Q96E35 227 aaPredicted RBP25.52■■□□□ 1.68
USP42-202ENST00000404008 PIK3IP1Q96FE7 263 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 ADI1Q9BV57 179 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 WDR76Q9H967 626 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 MARCH7Q9H992 704 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 KCNG2Q9UJ96 466 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 FBXL3Q9UKT7 428 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 POLR1DQ9Y2S0 133 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 TIMM10BQ9Y5J6 103 aa25.52■■□□□ 1.68
USP42-202ENST00000404008 FAM221AA4D161 298 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 CCDC182A6NF36 153 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 CECR9P0C854 216 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 PTAFRP25105 342 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 CD40P25942 277 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 GSTT1P30711 240 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 AQP4P55087 323 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 RPS7P62081 194 aaKnown RBP25.51■■□□□ 1.67
USP42-202ENST00000404008 ADAM8P78325 824 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 PSG4Q00888 419 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 ZNF584Q8IVC4 421 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 GID4Q8IVV7 300 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 C14orf79Q96F83 325 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 TEAD3Q99594 435 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 OR2H1Q9GZK4 316 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 CYB5R1Q9UHQ9 305 aa25.51■■□□□ 1.67
USP42-202ENST00000404008 LRBAP50851 2863 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 RAB39AQ14964 217 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 PABPC1L2AQ5JQF8 200 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 SLC25A30Q5SVS4 291 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 B3GLCTQ6Y288 498 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 MEPCEQ7L2J0 689 aaKnown RBP25.5■■□□□ 1.67
USP42-202ENST00000404008 ENTHD1Q8IYW4 607 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 MS4A3Q96HJ5 214 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 HS3ST6Q96QI5 342 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 APOL4Q9BPW4 351 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 WNT5BQ9H1J7 359 aa25.5■■□□□ 1.67
USP42-202ENST00000404008 H2AFY2Q9P0M6 372 aaPredicted RBP25.5■■□□□ 1.67
USP42-202ENST00000404008 H0YAE9 185 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 SERPINA5P05154 406 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 PSKH1P11801 424 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 GABRB1P18505 474 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 CAPGP40121 348 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 ENTPD1P49961 510 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 SCRN3Q0VDG4 424 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 PCK2Q16822 640 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 TEX30Q5JUR7 227 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 ZNF691Q5VV52 312 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 SLC18B1Q6NT16 456 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 TIGD4Q8IY51 512 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 ZNF582Q96NG8 517 aaPredicted RBP25.49■■□□□ 1.67
USP42-202ENST00000404008 INTS14Q96SY0 518 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 CDADC1Q9BWV3 514 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 RASSF1Q9NS23 344 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 DNAJC27Q9NZQ0 273 aa25.49■■□□□ 1.67
USP42-202ENST00000404008 TACC2O95359 2948 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms