RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 C2orf42Q9NWW7 574 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 YIF1AO95070 293 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 NUTF2P61970 127 aaKnown RBP9.14□□□□□ -0.95
PTPRM-203ENST00000400060 HLA-DRB3P79483 266 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 IL10RAQ13651 578 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 TMEM182Q6ZP80 229 aaPredicted RBP9.14□□□□□ -0.95
PTPRM-203ENST00000400060 FAM58AQ8N1B3 248 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 ARRDC1Q8N5I2 433 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 BOCQ9BWV1 1114 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 WDR76Q9H967 626 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 SFXN1Q9H9B4 322 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 SLCO1C1Q9NYB5 712 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 MBD1Q9UIS9 605 aaPredicted RBP9.14□□□□□ -0.95
PTPRM-203ENST00000400060 KCNE5Q9UJ90 142 aa9.14□□□□□ -0.95
PTPRM-203ENST00000400060 MRPS23Q9Y3D9 190 aaKnown RBP9.14□□□□□ -0.95
PTPRM-203ENST00000400060 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 LANCL1O43813 399 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CRHP06850 196 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 EDN3P14138 238 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 RPS24P62847 133 aaKnown RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TPGS2Q68CL5 300 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CYB561A3Q8NBI2 242 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 HOXB13Q92826 284 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TMEM106AQ96A25 262 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 R3HDM4Q96D70 268 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 PEX11GQ96HA9 241 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 MS4A10Q96PG2 267 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 PCED1AQ9H1Q7 454 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 SOHLH2Q9NX45 425 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 IL20RAQ9UHF4 553 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 GPR55Q9Y2T6 319 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 A0A087WUU8 490 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 C9orf170A2RU37 121 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CLDN4O14493 209 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TBX18O95935 607 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CD8AP01732 235 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 GAPDHP04406 335 aaKnown RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 EDN1P05305 212 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ELNP15502 786 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 MUC1P15941 1255 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 PMELP40967 661 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CASP6P55212 293 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 RAB11AP62491 216 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TRIM61Q5EBN2 209 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 NCR3LG1Q68D85 454 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CYHR1Q6ZMK1 362 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ZNF280BQ86YH2 543 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 LGI3Q8N145 548 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CSNK1A1LQ8N752 337 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 OR10A7Q8NGE5 316 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 C5orf34Q96MH7 638 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 PTPN18Q99952 460 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 NICN1Q9BSH3 213 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TLNRD1Q9H1K6 362 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 NPIPA5E9PKD4 350 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ZNF28P17035 718 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 HABP2Q14520 560 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ALG10Q5BKT4 473 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TOMM20LQ6UXN7 152 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 DPY19L4Q7Z388 723 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 C7orf61Q8IZ16 206 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CMTM1Q8IZ96 169 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ZNF738Q8NE65 137 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 OR11G2Q8NGC1 345 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 KCNG3Q8TAE7 436 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 F2RL3Q96RI0 385 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 SELENOIQ9C0D9 397 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 EHFQ9NZC4 300 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CACNG4Q9UBN1 327 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 NPIPA1Q9UND3 350 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 TBX19O60806 448 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 MMP2P08253 660 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 IGFBP1P08833 259 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 POU3F2P20265 443 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 BCKDHBP21953 392 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ARHGAP19Q14CB8 494 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 SURF2Q15527 256 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 NKAIN1Q4KMZ8 207 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 JMJD6Q6NYC1 403 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 DPPA3Q6W0C5 159 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 SLC22A24Q8N4F4 322 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 CDRT4Q8N9R6 151 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 LCN9Q8WX39 176 aa9.13□□□□□ -0.95
PTPRM-203ENST00000400060 SMG9Q9H0W8 520 aaKnown RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 ISG20L2Q9H9L3 353 aaKnown RBP9.13□□□□□ -0.95
PTPRM-203ENST00000400060 FIGNL2A6NMB9 653 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 HPNP05981 417 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 KLK3P07288 261 aaPredicted RBP9.12□□□□□ -0.95
PTPRM-203ENST00000400060 SEC11BP0C7V7 166 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 EMP2P54851 167 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 LIM2P55344 173 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 EGR3Q06889 387 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 PMS2P11Q13670 270 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 CCL14Q16627 93 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 ATP6V1FQ16864 119 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 LAIR1Q6GTX8 287 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 GDF6Q6KF10 455 aaPredicted RBP9.12□□□□□ -0.95
PTPRM-203ENST00000400060 ATRAIDQ6UW56 229 aa9.12□□□□□ -0.95
PTPRM-203ENST00000400060 GKN2Q86XP6 184 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms