RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SLC5A6Q9Y289 635 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 TNFSF11O14788 317 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 RAF1P04049 648 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 TGM1P22735 817 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 ETFDHQ16134 617 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 CHRFAM7AQ494W8 412 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 PXKQ7Z7A4 578 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 CCDC190Q86UF4 302 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 A0A087WZY1 265 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 TEX13DA0A0J9YY54 714 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 PLPP3O14495 311 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 RPS4Y1P22090 263 aaKnown RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 CDAP32320 146 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 DSCR4P56555 118 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 MRPL21Q7Z2W9 205 aaKnown RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 PLA2G3Q9NZ20 509 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 FBXO4Q9UKT5 387 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 TCFL5Q9UL49 500 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF254O75437 659 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 DNASE1P24855 282 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 CASP3P42574 277 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 WIPI1Q5MNZ9 446 aaPredicted RBP12.63□□□□□ -0.39
SCAF4-202ENST00000399804 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 MFSD4AQ8N468 514 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 NARS2Q96I59 477 aaKnown RBP12.63□□□□□ -0.39
SCAF4-202ENST00000399804 TXNDC15Q96J42 360 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 TMEM246Q9BRR3 403 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 IRF2BPLQ9H1B7 796 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 NUBP2Q9Y5Y2 271 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 ACACAQ13085 2346 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 TRABD2BA6NFA1 517 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 IGHA1P01876 353 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 THY1P04216 161 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 MSR1P21757 451 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF85Q03923 595 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 FZD5Q13467 585 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 SIAH3Q8IW03 269 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 TMEM178AQ8NBL3 297 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 C11orf40Q8WZ69 217 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 OR8B4Q96RC9 309 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 METTL8Q9H825 291 aaKnown RBP12.63□□□□□ -0.39
SCAF4-202ENST00000399804 HAO2Q9NYQ3 351 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 STEAP1Q9UHE8 339 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 STMND1H3BQB6 276 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 SPNP16150 400 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 CBX5P45973 191 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 CLDN6P56747 220 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 NDUFA5Q16718 116 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 OR5T2Q8NGG2 359 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 OR51E1Q8TCB6 317 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 HSD17B8Q92506 261 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF486Q96H40 463 aaPredicted RBP12.63□□□□□ -0.39
SCAF4-202ENST00000399804 IP6K3Q96PC2 410 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 CHRNA10Q9GZZ6 450 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF442Q9H7R0 627 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 TAS2R4Q9NYW5 299 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 FBXL3Q9UKT7 428 aa12.63□□□□□ -0.39
SCAF4-202ENST00000399804 MDC1Q14676 2089 aaKnown RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 NAP1L6A6NFF2 107 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 PRR19A6NJB7 356 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 FTCDNL1E5RQL4 147 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 IFI6P09912 130 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 EPXP11678 715 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 SRP9P49458 86 aaKnown RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 EIF3IQ13347 325 aaKnown RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 SSPNQ14714 243 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 HES3Q5TGS1 186 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 DEFB124Q8NES8 71 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 ADIPOR1Q96A54 375 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 DCLRE1CQ96SD1 692 aaKnown RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 ATF6BQ99941 703 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 COPS3Q9UNS2 423 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 C17orf51A8MQB3 221 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 ZNF81P51508 661 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 TGFBR3Q03167 851 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 ATXN7L3Q14CW9 347 aaPredicted RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 MESTQ5EB52 335 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 CT55Q8WUE5 264 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 PIGCQ92535 297 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 AIPO00170 330 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 TSPAN2O60636 221 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 MPZL1O95297 269 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 RECKO95980 971 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
SCAF4-202ENST00000399804 NGFRP08138 427 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 CSF1P09603 554 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 CSF3P09919 207 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 ACHEP22303 614 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 CLDN15P56746 228 aa12.62□□□□□ -0.39
SCAF4-202ENST00000399804 RNLSQ5VYX0 342 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms