RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 CDC42EP3Q9UKI2 254 aa12.74□□□□□ -0.37
SMIM11A-203ENST00000399299 LOC100509620A0A075B734 347 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 C5orf49A4QMS7 147 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 UNC119BA6NIH7 251 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 H3BSA7 217 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 DYNC1I1O14576 645 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 CLPTM1O96005 669 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 IGHV3-13P01766 116 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 COX5BP10606 129 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 CTLA4P16410 223 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 WNT5AP41221 380 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 RPS6KA3P51812 740 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 CHN2P52757 468 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 SPIBQ01892 262 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 PCGF3Q3KNV8 242 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 CHRFAM7AQ494W8 412 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 MTX3Q5HYI7 312 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 ELFN2Q5R3F8 820 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 SMARCD3Q6STE5 483 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 ZER1Q7Z7L7 766 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 ARHGAP24Q8N264 748 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 FITM2Q8N6M3 262 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 OR1J1Q8NGS3 322 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 RDH5Q92781 318 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 HPS1Q92902 700 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 GPA33Q99795 319 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 CHODLQ9H9P2 273 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 ACTR3BQ9P1U1 418 aa12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 EIF3KQ9UBQ5 218 aaKnown RBP12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 NDRG4Q9ULP0 352 aaKnown RBP12.73□□□□□ -0.37
SMIM11A-203ENST00000399299 C17orf100A8MU93 164 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 LILRA1O75019 489 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 NCR1O76036 304 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 FAM107AO95990 144 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 HPXP02790 462 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 SCG5P05408 212 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 NAT2P11245 290 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 ACHEP22303 614 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 CCNOP22674 350 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 FPR3P25089 353 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 IFNGR2P38484 337 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 SCRN3Q0VDG4 424 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF718Q3SXZ3 478 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 FAM166AQ6J272 317 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF101Q8IZC7 436 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 MSI2Q96DH6 328 aaKnown RBP12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 SYT4Q9H2B2 425 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 MUC13Q9H3R2 512 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 HINT3Q9NQE9 182 aaKnown RBP12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 LPAR3Q9UBY5 353 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 IER3IP1Q9Y5U9 82 aa12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 FBN1P35555 2871 aaKnown RBP12.72□□□□□ -0.37
SMIM11A-203ENST00000399299 B2RBV5 119 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 SOCS2O14508 198 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 IMPA2O14732 288 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 ARPC3O15145 178 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 OR10H3O60404 316 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 LMX1BO60663 402 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 KHDRBS3O75525 346 aaKnown RBP12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 MT-ND5P03915 603 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 LYNX1P0DP58 116 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 RRM2P31350 389 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 SLC6A6P31641 620 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 LSM6P62312 80 aaKnown RBP12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 AQP6Q13520 282 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 MBNL2Q5VZF2 373 aaKnown RBP12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 ZNF774Q6NX45 483 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 TMEM154Q6P9G4 183 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 UGT2A3Q6UWM9 527 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 PTCHD4Q6ZW05 846 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 ZDHHC21Q8IVQ6 265 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 GLB1L2Q8IW92 636 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 ICA1LQ8NDH6 482 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 FANK1Q8TC84 345 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 MARS2Q96GW9 593 aaKnown RBP12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 NSL1Q96IY1 281 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 SNX18Q96RF0 628 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 OR52D1Q9H346 318 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 ELOVL3Q9HB03 270 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 EMC7Q9NPA0 242 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 IL20RAQ9UHF4 553 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 TMCC3Q9ULS5 477 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 KCNS2Q9ULS6 477 aa12.71□□□□□ -0.37
SMIM11A-203ENST00000399299 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 LRP5LA4QPB2 252 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 SLC16A7O60669 478 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 RP2O75695 350 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 KRT36O76013 467 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 FAM157CP0CG43 387 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 CALB2P22676 271 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 GCH1P30793 250 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 MAGEA2P43356 314 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 GSSP48637 474 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 HMGA2P52926 109 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 TMEM33P57088 247 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms