RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 YIF1AO95070 293 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 ALPLP05186 524 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 TEAD1P28347 426 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 GLYATL3Q5SZD4 288 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 ZFP82Q8N141 532 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF454Q8N9F8 522 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 KCNG3Q8TAE7 436 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 KCNJ15Q99712 375 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 LRIT2A6NDA9 550 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 IL1AP01583 271 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 IL11RAQ14626 422 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 Q499Y3 187 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 H1FNTQ75WM6 255 aaPredicted RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 TMEM200AQ86VY9 491 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 SLC22A24Q8N4F4 322 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 OR51D1Q8NGF3 324 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 OR52N5Q8NH56 324 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 RNF170Q96K19 258 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 METTL17Q9H7H0 456 aaPredicted RBP13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 ERVMER34-1Q9H9K5 563 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 NTNG1Q9Y2I2 539 aa13.01□□□□□ -0.33
PCDHA11-201ENST00000398640 GUSBP08236 651 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CLDN15P56746 228 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 RAB11AP62491 216 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 TATDN3Q17R31 274 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF767PQ75MW2 155 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 RETREG3Q86VR2 466 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 HPSE2Q8WWQ2 592 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 MVB12AQ96EY5 273 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 TEX37Q96LM6 180 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 BANF2Q9H503 90 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 GLTPQ9NZD2 209 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CRYABP02511 175 aaKnown RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A6P0DMU7 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A5P0DMU8 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A7P0DMV0 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A8P0DMV1 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A9P0DMV2 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 GDNFP39905 211 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF74Q16587 644 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 DUSP5Q16690 384 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ACTBL2Q562R1 376 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A2Q5DJT8 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A1Q5HYN5 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 NXNL2Q5VZ03 156 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 Q6ZSR9 355 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 UBAC2Q8NBM4 344 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CT45A3Q8NHU0 189 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ITPKCQ96DU7 683 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CGGBP1Q9UFW8 167 aaPredicted RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 SGCEO43556 437 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CRYAAP02489 173 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ZGLP1P0C6A0 271 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 TRIM23P36406 574 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 SRP14P37108 136 aaKnown RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 DLX5P56178 289 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 ARHGAP11BQ3KRB8 267 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CLVS2Q5SYC1 327 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 TMEM215Q68D42 235 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 GLIPR1L1Q6UWM5 242 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF486Q96H40 463 aaPredicted RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 RTL8AQ9BWD3 113 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 BARHL1Q9BZE3 327 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 OR52A5Q9H2C5 316 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 OR6C76A6NM76 312 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 H7C1Q1 480 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 YIF1BQ5BJH7 314 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 HIST2H3PS2Q5TEC6 136 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 SFXN4Q6P4A7 337 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 RBM45Q8IUH3 476 aaKnown RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 SLC35G3Q8N808 338 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 GJC3Q8NFK1 279 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 OR52I1Q8NGK6 324 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 CA5BP1Q8WTZ4 195 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 UHRF2Q96PU4 802 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 SHARPINQ9H0F6 387 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 RBMS2Q15434 407 aaKnown RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
PCDHA11-201ENST00000398640 BCORP1Q8N888 145 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 ZNF583Q96ND8 569 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 MED17Q9NVC6 651 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 KIAA1456Q9P272 454 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 PRELID3BQ9Y3B1 194 aa13□□□□□ -0.33
PCDHA11-201ENST00000398640 C7orf72A4D263 438 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 SLC22A20A6NK97 555 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 GPRIN2O60269 458 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 STARD6P59095 220 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 TESK1Q15569 626 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 VASH2Q86V25 355 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 FBXO17Q96EF6 278 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 Q96M85 177 aa12.99□□□□□ -0.33
PCDHA11-201ENST00000398640 GINS3Q9BRX5 216 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms