RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 RBBP6Q7Z6E9 1792 aaKnown RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 IFITM5A6NNB3 132 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 EPHA1P21709 976 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 IL2RGP31785 369 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC17A1Q14916 467 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF74Q16587 644 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 MRM1Q6IN84 353 aaKnown RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 EGFL6Q8IUX8 553 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 TCEAL3Q969E4 200 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 PIGTQ969N2 578 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 ISG20L2Q9H9L3 353 aaKnown RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 SCPEP1Q9HB40 452 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF223Q9UK11 482 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 HDGFL3Q9Y3E1 203 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 HRH3Q9Y5N1 445 aa12.93□□□□□ -0.34
PCDHGA11-201ENST00000398587 TDRD15B5MCY1 1934 aaKnown RBP12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 ARPC3O15145 178 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 GREM1O60565 184 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 NXPH1P58417 271 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 CD276Q5ZPR3 534 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 SIGLEC11Q96RL6 698 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 C20orf85Q9H1P6 137 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 TAS2R4Q9NYW5 299 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A087WZY1 265 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 A0A0D9SG52 128 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 ERVK-16P61578 105 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 RFPL4BQ6ZWI9 263 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR13C5Q8NGS8 318 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR52N5Q8NH56 324 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR52I2Q8NH67 350 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 SPACA9Q96E40 222 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 B9D1Q9UPM9 204 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 IKZF1Q13422 519 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 CORO6Q6QEF8 472 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 SYT9Q86SS6 491 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 SLC7A5P1Q8MH63 180 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 FAM71CQ8NEG0 241 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR2G2Q8NGZ5 317 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 KCNG2Q9UJ96 466 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 PIGLQ9Y2B2 252 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 FAM166BA8MTA8 275 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 M0QYG6 137 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 ACTL6BO94805 426 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 BLOC1S1P78537 153 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 NAXDQ8IW45 347 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR1M1Q8NGA1 313 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 VN1R1Q9GZP7 353 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 FAM60AQ9NP50 221 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 MMP25Q9NPA2 562 aa12.92□□□□□ -0.34
PCDHGA11-201ENST00000398587 PMS2P2O95744 297 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 LPLP06858 475 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 SEMA6DQ8NFY4 1073 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR1L3Q8NH93 324 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 GCDHQ92947 438 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 DVL3Q92997 716 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 LRFN1Q9P244 771 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 ANKUB1A6NFN9 424 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 TMEM127O75204 238 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 NFYAP23511 347 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 ABCD3P28288 659 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 HOXD12P35452 270 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 DDOSTP39656 456 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 FAPQ12884 760 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 FOXF1Q12946 379 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 RDH10Q8IZV5 341 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 UCN3Q969E3 161 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 DNAJB12Q9NXW2 375 aaKnown RBP12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 B3GNT2Q9NY97 397 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 FITM1A5D6W6 292 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 OPCMLQ14982 345 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 KLF13Q9Y2Y9 288 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 FAM186AA6NE01 2351 aa12.91□□□□□ -0.34
PCDHGA11-201ENST00000398587 GPR137BO60478 399 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 CELA2BP08218 269 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 SRP9P49458 86 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZNF133P52736 654 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 RPL23AP62750 156 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 DGCR2P98153 550 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 RBPJQ06330 500 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 POU4F3Q15319 338 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 GPR157Q5UAW9 335 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 SPRED2Q7Z698 418 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 UBE3DQ7Z6J8 389 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 R4GMQ9 66 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 CCL11P51671 97 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 UBA52P62987 128 aaKnown RBP12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 TMEM185AQ8NFB2 350 aa12.9□□□□□ -0.34
PCDHGA11-201ENST00000398587 NRTNQ99748 197 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms