RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RSG1Q9BU20 258 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 PHF11Q9UIL8 331 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ADAM29Q9UKF5 820 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ZFP30Q9Y2G7 519 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NCOR1O75376 2440 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ZNF840PA6NDX5 716 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SCDO00767 359 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MAGEB4O15481 346 aaPredicted RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 DNPH1O43598 174 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 TIMP1P01033 207 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 VIPP01282 170 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MPC1LP0DKB6 136 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 C1GALT1C1LP0DN25 315 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 EPHA2P29317 976 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 AQP1P29972 269 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC22A10Q63ZE4 541 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ZNF620Q6ZNG0 422 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SSX6Q7RTT6 188 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OVCH1Q7RTY7 1134 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 LGI4Q8N135 537 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 GGHQ92820 318 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OSTF1Q92882 214 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 PYCR2Q96C36 320 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CTHRC1Q96CG8 243 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 TMEM19Q96HH6 336 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 GPA33Q99795 319 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RHNO1Q9BSD3 238 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SNHG12Q9BXW3 62 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MIR1-1HGQ9H1L0 117 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC2A9Q9NRM0 540 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 GKN1Q9NS71 199 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 TMEM161AQ9NX61 479 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SMCO3A2RU48 225 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 H0Y980 276 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 B4GALT3O60512 393 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 MT-CO2P00403 227 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SNRPCP09234 159 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 ZNF28P17035 718 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 RPL3P39023 403 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 CDH12P55289 794 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 FPGSQ05932 587 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 PYY3Q5JQD4 70 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 LANCL3Q6ZV70 420 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 GRASPQ7Z6J2 395 aaPredicted RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 NPAS3Q8IXF0 933 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 C10orf111Q8N326 155 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 OR6K2Q8NGY2 324 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 GNPDA2Q8TDQ7 276 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 DPH2Q9BQC3 489 aaPredicted RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 FN3KQ9H479 309 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC28A3Q9HAS3 691 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 CYSLTR2Q9NS75 346 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC2A8Q9NY64 477 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 FARSAQ9Y285 508 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 HS3ST3A1Q9Y663 406 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 COL4A2P08572 1712 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 CPED1A4D0V7 1026 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 ANHXE9PGG2 379 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 AIPO00170 330 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 PEX12O00623 359 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SH3BGRLO75368 114 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SEMG1P04279 462 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 PLA2G5P39877 138 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TAS2R41P59536 307 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 RPS20P60866 119 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SNRPD2P62316 118 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SELENOWP63302 87 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 UGT8Q16880 541 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TRIM40Q6P9F5 258 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SMARCD3Q6STE5 483 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SPRED2Q7Z698 418 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 PTOV1Q86YD1 416 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TOMM40LQ969M1 308 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 ELMOD3Q96FG2 381 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 WBP1Q96G27 269 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 ISYNA1Q9NPH2 558 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 CALML5Q9NZT1 146 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 LSM7Q9UK45 103 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 LOC400499M0QZD8 3231 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TMEM72A0PK05 275 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 M0R082 166 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 DXOO77932 396 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SPNP16150 400 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 BMP7P18075 431 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 OR3A1P47881 315 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 PPOXP50336 477 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 RANP62826 216 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 GPR50Q13585 617 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 C1DQ13901 141 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TAF9Q16594 264 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 C3orf36Q3SXR2 165 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 LAIR1Q6GTX8 287 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TCF24Q7RTU0 167 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC5A8Q8N695 610 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 TMEM116Q8NCL8 245 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 OR1K1Q8NGR3 316 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 OR10X1Q8NGY0 326 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 ZDHHC1Q8WTX9 485 aa5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 GEMIN6Q8WXD5 167 aaKnown RBP5.97□□□□□ -1.45
TM9SF4-202ENST00000398022 PIGTQ969N2 578 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms