RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ZNF593O00488 134 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 MRPL3P09001 348 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 MMP7P09237 267 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SBK2P0C263 348 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 HOXC12P31275 282 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 NAA10P41227 235 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC15A1P46059 708 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 C1QTNF12Q5T7M4 302 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC16A9Q7RTY1 509 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 DPPA2Q7Z7J5 298 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SYT9Q86SS6 491 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 OR51G2Q8NGK0 314 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 OR6N2Q8NGY6 317 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 FGFBP3Q8TAT2 258 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 NANOS1Q8WY41 292 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 MRPS18AQ9NVS2 196 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 B3GNT2Q9NY97 397 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CYB5R1Q9UHQ9 305 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 AMDHD2Q9Y303 409 aa17.01■□□□□ 0.31
MAP1LC3A-203ENST00000397709 C12orf71A8MTZ7 269 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC1A7O00341 560 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 UBL3O95164 117 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 HLA-HP01893 362 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PPP3CBP16298 524 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 UBE2NP61088 152 aaKnown RBP17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 TUBA1BP68363 451 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 TUBA4AP68366 448 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 AQP6Q13520 282 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC36A2Q495M3 483 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC18B1Q6NT16 456 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 TUBA1AQ71U36 451 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 LGALS12Q96DT0 336 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 YIPF3Q9GZM5 350 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 KCNN2Q9H2S1 579 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 NOX3Q9HBY0 568 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 ASH2LQ9UBL3 628 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 EXOGQ9Y2C4 368 aaKnown RBP17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 POLR1DQ9Y2S0 133 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC25A15Q9Y619 301 aa17■□□□□ 0.31
MAP1LC3A-203ENST00000397709 J3QRE1 110 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 XPNPEP2O43895 674 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 FAM20BO75063 409 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 APOL3O95236 402 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SPARCP09486 303 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PATE4P0C8F1 98 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 ZNF32P17041 273 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 RPS27P42677 84 aaKnown RBP16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CAPZA2P47755 286 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PCBD1P61457 104 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CSNK2BP67870 215 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 HIST1H3AP68431 136 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 RAB40BQ12829 278 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 TAB1Q15750 504 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 HIST2H3PS2Q5TEC6 136 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 C22orf34Q6ZV56 151 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 HIST2H3AQ71DI3 136 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SHFQ7M4L6 423 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 DPY19L4Q7Z388 723 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CDC20BQ86Y33 519 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 LINC00346Q8IVM7 164 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 BPIFB6Q8NFQ5 453 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 OR4F15Q8NGB8 312 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 OR52N5Q8NH56 324 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 HSD17B8Q92506 261 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CDADC1Q9BWV3 514 aa16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 GDF2Q9UK05 429 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SPTBN1Q01082 2364 aaKnown RBP16.99■□□□□ 0.31
MAP1LC3A-203ENST00000397709 A0A1W2PR80 420 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 TMCC2O75069 709 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CCDC159P0C7I6 412 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CD79AP11912 226 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PIPP12273 146 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SCRN3Q0VDG4 424 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 KLHL22Q53GT1 634 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CORO6Q6QEF8 472 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SSX8Q7RTT4 187 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SLC35F2Q8IXU6 374 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 ZNF454Q8N9F8 522 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 OTOSQ8NHW6 89 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 SMAP2Q8WU79 429 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 GGHQ92820 318 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 MNTQ99583 582 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 RHNO1Q9BSD3 238 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CCNB1IP1Q9NPC3 277 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 FKBP14Q9NWM8 211 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 CNOT2Q9NZN8 540 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PSORS1C1Q9UIG5 152 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 LRCH1Q9Y2L9 728 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 TIMM10BQ9Y5J6 103 aa16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 KLF2Q9Y5W3 355 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3A-203ENST00000397709 IRGMA1A4Y4 181 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 C19orf84I3L1E1 186 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 WNT11O96014 354 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 THBDP07204 575 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 ATP6V1E1P36543 226 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 ARR3P36575 388 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 RAB1AP62820 205 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PIGFQ07326 219 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 PPA1Q15181 289 aa16.97■□□□□ 0.31
MAP1LC3A-203ENST00000397709 GSG1Q2KHT4 349 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms