RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SERPINA5P05154 406 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NGFRP08138 427 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 JMJD7P0C870 316 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SDHAP31040 664 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SIM1P81133 766 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CCINQ13939 588 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 SOHLH1Q5JUK2 328 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF684Q5T5D7 378 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 URM1Q9BTM9 101 aaKnown RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 HCAR1Q9BXC0 346 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 APOBEC3BQ9UH17 382 aaKnown RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PLSCR5A0PG75 271 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CBY3A6NI87 242 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PRRT4C9JH25 899 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR8G3PP0DMU2 310 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MPZP25189 248 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 RPS4XP62701 263 aaKnown RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NCMAPQ5T1S8 102 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 NHLRC1Q6VVB1 395 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 ZNF595Q8IYB9 648 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CMTM4Q8IZR5 234 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 WDR92Q96MX6 357 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PIGQQ9BRB3 760 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TMPRSS5Q9H3S3 457 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CSAG2Q9Y5P2 127 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TRBV23-1A0A0A0MS06 115 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 A0A1B0GWA3 101 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 BRINP1O60477 761 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR2F2O95006 317 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR2C1O95371 312 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 CSTAP01040 98 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 FABP4P15090 132 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR2F1Q13607 317 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PWWP2BQ6NUJ5 590 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 DNM1P34Q6PK57 102 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MEX3BQ6ZN04 569 aaKnown RBP4.97□□□□□ -1.61
PTPRD-205ENST00000397611 Q6ZRG5 221 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR51D1Q8NGF3 324 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 OR52E1Q8NGJ3 308 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MYADMQ96S97 322 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TBL1XR1Q9BZK7 514 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 TAF9BQ9HBM6 251 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 MTFP1Q9UDX5 166 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 PILRAQ9UKJ1 303 aa4.97□□□□□ -1.61
PTPRD-205ENST00000397611 BTBD17A6NE02 478 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 C10orf142B7Z368 130 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 RNH1P13489 461 aaKnown RBP4.96□□□□□ -1.61
PTPRD-205ENST00000397611 BTCP35070 178 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 HOXA1P49639 335 aaPredicted RBP4.96□□□□□ -1.61
PTPRD-205ENST00000397611 SNU13P55769 128 aaKnown RBP4.96□□□□□ -1.61
PTPRD-205ENST00000397611 COTL1Q14019 142 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 GSG1Q2KHT4 349 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 GAB4Q2WGN9 574 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 FAHD2BQ6P2I3 314 aaPredicted RBP4.96□□□□□ -1.61
PTPRD-205ENST00000397611 LILRB2Q8N423 598 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 SIRT6Q8N6T7 355 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 OR51T1Q8NGJ9 327 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 RAB39BQ96DA2 213 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 FAHD2AQ96GK7 314 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 C16orf58Q96GQ5 468 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 MEGF10Q96KG7 1140 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 SLC17A9Q9BYT1 436 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 AICDAQ9GZX7 198 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 GAR1Q9NY12 217 aaKnown RBP4.96□□□□□ -1.61
PTPRD-205ENST00000397611 FBXO7Q9Y3I1 522 aa4.96□□□□□ -1.61
PTPRD-205ENST00000397611 TRBV5-5A0A0J9YX44 114 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SCDO00767 359 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 ITGB2P05107 769 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 DCTDP32321 178 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 DCAF7P61962 342 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SRSF4Q08170 494 aaKnown RBP4.96□□□□□ -1.62
PTPRD-205ENST00000397611 FAM53BQ14153 422 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTPRD-205ENST00000397611 LINC00303Q3SY05 128 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 PRRT3Q5FWE3 981 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 AGBL4Q5VU57 503 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SGPP2Q8IWX5 399 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 DEFB118Q96PH6 123 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 NUDT16L1Q9BRJ7 211 aaKnown RBP4.96□□□□□ -1.62
PTPRD-205ENST00000397611 PCYT1BQ9Y5K3 369 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-205ENST00000397611 AHCTF1Q8WYP5 2266 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 OR2M5A3KFT3 312 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 A6NCN8 305 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 DVL2O14641 736 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SIGLEC5O15389 551 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 CYB5BO43169 146 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 STK17BO94768 372 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 TAS2R20P59543 309 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SNRPNP63162 240 aaKnown RBP4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SIGLEC14Q08ET2 396 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SERTAD2Q14140 314 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 ETFDHQ16134 617 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 TUSC1Q2TAM9 212 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SLC18B1Q6NT16 456 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 SKA3Q8IX90 412 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 OR10D4PQ8NGN7 298 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 OR5M9Q8NGP3 310 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 MVB12AQ96EY5 273 aa4.96□□□□□ -1.62
PTPRD-205ENST00000397611 WDR89Q96FK6 387 aaPredicted RBP4.96□□□□□ -1.62
PTPRD-205ENST00000397611 DGAT2Q96PD7 388 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms